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L2_023_000G1_scaffold_585

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_585_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(128..3658)
DNA (3531bp) protein (1177aa)
Cell surface protein with gram positive anchor domain n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZA8_BIFBP
cell surface protein
Cell surface protein with gram positive anchor domain {ECO:0000313|EMBL:KFI42384.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_023_000G1_scaffold_585_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4321..4701)
DNA (381bp) protein (127aa)
acyP; acylphosphatase (EC:3.6.1.7)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Acylphosphatase n=4 Tax=Bifidobacterium RepID=E3ENL3_BIFBS
L2_023_000G1_scaffold_585_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4842..5666)
DNA (825bp) protein (275aa)
Pyridoxal phosphate enzyme, YggS family n=2 Tax=Bifidobacterium RepID=E4V7Q6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:CDB22485.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_023_000G1_scaffold_585_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5756..6901)
DNA (1146bp) protein (382aa)
tRNA ligase class I, catalytic domain protein n=2 Tax=Bifidobacterium RepID=U2DSD2_BIFBI
Putative glutamyl-tRNA synthase {ECO:0000313|EMBL:BAQ97491.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
gluQ; glutamyl-Q tRNA(Asp) synthetase
L2_023_000G1_scaffold_585_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6934..7776)
DNA (843bp) protein (281aa)
Conserved hypothetical membrane protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZA4_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI82647.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_023_000G1_scaffold_585_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7953..8684)
DNA (732bp) protein (244aa)
Glycerol uptake facilitator protein n=5 Tax=Bifidobacterium bifidum RepID=E3ENK9_BIFBS
glpF; putative glycerol uptake facilitator protein
Glycerol uptake facilitator protein {ECO:0000313|EMBL:ADO52501.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_585_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9567..10091)
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V7Q1_BIFBI
Putative cell surface protein {ECO:0000313|EMBL:BAQ97488.1}; Uncharacterized protein {ECO:0000313|EMBL:ERI82650.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
chitinase A
L2_023_000G1_scaffold_585_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10088..10837)
DNA (750bp) protein (250aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=I3WG41_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42378.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_023_000G1_scaffold_585_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10894..11181
DNA (288bp) protein (96aa)
Tat pathway signal sequence domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DM90_BIFBI
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:ERI82652.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_023_000G1_scaffold_585_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11077..11301)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WG40_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03853.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_000G1_scaffold_585_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11768..12214)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=5 Tax=Bifidobacterium RepID=E3ENK6_BIFBS
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_023_000G1_scaffold_585_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12232..12480)
DNA (249bp) protein (83aa)
30S ribosomal protein S18 n=7 Tax=Bifidobacterium RepID=E3ENK5_BIFBS
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_023_000G1_scaffold_585_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12566..13249)
DNA (684bp) protein (228aa)
Single-stranded DNA-binding protein n=2 Tax=Bifidobacterium bifidum RepID=I3WG37_BIFBI
ssb; single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_000G1_scaffold_585_14
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13307..13603)
DNA (297bp) protein (99aa)
30S ribosomal protein S6 n=8 Tax=Bifidobacterium RepID=E3ENK3_BIFBS
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_000G1_scaffold_585_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13652..15106)
DNA (1455bp) protein (485aa)
Putative membrane protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WG35_BIFBI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFL03848.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_000G1_scaffold_585_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15825..16535
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V7P3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAQ97480.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_023_000G1_scaffold_585_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16716..19919
DNA (3204bp) protein (1068aa)
Heme utilization or adhesion related exo protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WG33_BIFBI
Heme utilization or adhesion related exo protein {ECO:0000313|EMBL:AFL03846.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
heme utilization or adhesion related exo protein
L2_023_000G1_scaffold_585_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20110..21123
DNA (1014bp) protein (338aa)
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EFR49633.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EFR49633.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Ribose-phosphate pyrophosphokinase n=7 Tax=Bifidobacterium RepID=E3ENJ9_BIFBS
prsA1; ribose-phosphate pyrophosphokinase
L2_023_000G1_scaffold_585_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21258..27053)
DNA (5796bp) protein (1932aa)
Endo-alpha-N-acetylgalactosaminidase, cellwall anchor protein family {ECO:0000313|EMBL:KFI42369.1}; EC=3.2.1.97 {ECO:0000313|EMBL:KFI42369.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
F5/8 type C domain protein n=3 Tax=Bifidobacterium bifidum RepID=U2BWS8_BIFBI
multiple sugar recognition domains
L2_023_000G1_scaffold_585_20
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27560..28591)
DNA (1032bp) protein (344aa)
Putative phosphodiesterase n=2 Tax=Bifidobacterium RepID=I3WG29_BIFBI
putative phosphodiesterase
Putative phosphodiesterase {ECO:0000313|EMBL:CDB24199.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_000G1_scaffold_585_21
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28621..29766)
DNA (1146bp) protein (382aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
D-alanine--D-alanine ligase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HDJ7_9BIFI
ddlA; D-alanine--D-alanine ligase
L2_023_000G1_scaffold_585_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30002..30997)
DNA (996bp) protein (332aa)
gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=4 Tax=Bifidobacterium bifidum RepID=E3ENJ5_BIFBS
L2_023_000G1_scaffold_585_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31118..32002)
DNA (885bp) protein (295aa)
Phospholipid/glycerol acyltransferase n=6 Tax=Bifidobacterium RepID=E3ENJ4_BIFBS
phospholipid/glycerol acyltransferase
PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:KFI42365.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_023_000G1_scaffold_585_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32107..32949)
DNA (843bp) protein (281aa)
Transcription termination/antitermination protein NusG n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V7N5_BIFBI
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
nusG; transcription antitermination factor NusG
L2_023_000G1_scaffold_585_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32979..33206)
DNA (228bp) protein (76aa)
Protein translocase subunit SecE n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WG23_BIFBI
secE; pre protein translocase, SecE subunit
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_000G1_scaffold_585_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33495..34700)
DNA (1206bp) protein (402aa)
Aminotransferase n=3 Tax=Bifidobacterium RepID=E3ENJ1_BIFBS
aspC1; aminotransferase
Aminotransferase {ECO:0000313|EMBL:ADO52483.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_585_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34788..35918)
DNA (1131bp) protein (377aa)
proB; glutamate 5-kinase ProB (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Glutamate 5-kinase n=5 Tax=Bifidobacterium RepID=E3ENJ0_BIFBS
L2_023_000G1_scaffold_585_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36109..37794)
DNA (1686bp) protein (562aa)
GTPase Obg n=2 Tax=Bifidobacterium bifidum RepID=E4V7N1_BIFBI
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
obgE; GTP-binding protein, GTP1/OBG family ObgE
L2_023_000G1_scaffold_585_29
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38174..39277
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GN47_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23079.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_023_000G1_scaffold_585_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(39745..39996)
DNA (252bp) protein (84aa)
50S ribosomal protein L27 n=8 Tax=Bifidobacterium RepID=E3ELT4_BIFBS
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Displaying items 1-30 of 49 in total

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