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L2_023_000G1_scaffold_647

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_647_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45..1958)
DNA (1914bp) protein (638aa)
TrxB Thioredoxin reductase/Thioredoxin/Glutaredoxin family protein {ECO:0000313|EMBL:KFI42158.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KFI42158.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Putative alkyl hydroperoxide reductase F subunit n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DRN9_BIFBI
trxB1; Thioredoxin reductase/Thioredoxin/glutaredoxin family protein
L2_023_000G1_scaffold_647_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2303..2866)
DNA (564bp) protein (188aa)
ahpC; peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin {ECO:0000313|EMBL:EFR51259.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EFR51259.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Alkyl hydroperoxide reductase C22 protein n=8 Tax=Bifidobacterium RepID=E3ENG1_BIFBS
L2_023_000G1_scaffold_647_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3083..3832
DNA (750bp) protein (250aa)
cynT; carbonic anhydrase (EC:4.2.1.1)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Carbonic anhydrase n=6 Tax=Bifidobacterium RepID=I3WFG8_BIFBI
L2_023_000G1_scaffold_647_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3949..4524
DNA (576bp) protein (192aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VCE2_BIFBI
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFR51257.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
putative HTH-type transcriptional regulator
L2_023_000G1_scaffold_647_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4733..6055
DNA (1323bp) protein (441aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=E4VCE1_BIFBI
putative transport protein
Conserved hypothetical membrane spanning protein with DUF21 and CBS domains {ECO:0000313|EMBL:ADO52236.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_647_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6091..7164)
DNA (1074bp) protein (358aa)
Inner membrane protein n=4 Tax=Bifidobacterium bifidum RepID=I3WFG5_BIFBI
yddG; inner membrane protein
Membrane spanning protein {ECO:0000313|EMBL:KFI42153.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_023_000G1_scaffold_647_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7612..8091
DNA (480bp) protein (160aa)
DNA-binding ferritin-like protein for protection from oxidative damage, Dps family protein n=7 Tax=Bifidobacterium RepID=E3ENF6_BIFBS
dps; DNA protection during starvation protein
Ferritin-like protein {ECO:0000313|EMBL:EFR51254.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_023_000G1_scaffold_647_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8279..9028)
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VCD8_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR51253.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
putative metal-dependent hydrolase
L2_023_000G1_scaffold_647_9
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9305..10822)
DNA (1518bp) protein (506aa)
PTS system, ascorbate-specific IIC componet n=3 Tax=Bifidobacterium RepID=E3ENF4_BIFBS
PTS system, ascorbate-specific IIC componet
PTS system ascorbate-specific IIC componet {ECO:0000313|EMBL:CDB22354.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_000G1_scaffold_647_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10888..11160)
DNA (273bp) protein (91aa)
PTS system lactose/cellobiose specific transporter subunit IIB (EC:2.7.1.69)
PTS system, ascorbate-specific IIB component n=4 Tax=Bifidobacterium bifidum RepID=E3ENF3_BIFBS
PTS system lactose/cellobiose-specific transporter subunit IIB {ECO:0000313|EMBL:EKE50340.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_023_000G1_scaffold_647_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11284..11733)
DNA (450bp) protein (150aa)
PTS system, Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:KFI42148.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KFI42148.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DRP8_BIFBI
PTS system ascorbate-specific transporter subunit IIA
L2_023_000G1_scaffold_647_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12063..13115
DNA (1053bp) protein (351aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium bifidum RepID=E4NXS2_BIFBP
Transcriptional regulator, LacI family
Transcriptional regulator, LacI family protein {ECO:0000313|EMBL:EKE50342.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_023_000G1_scaffold_647_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13587..15923)
DNA (2337bp) protein (779aa)
nagZ; NagZ Beta-N-acetylhexosaminidase (EC:3.2.1.52)
NagZ Beta-N-acetylhexosaminidase n=2 Tax=Bifidobacterium bifidum RepID=E4NXS1_BIFBP
Beta-hexosaminidase {ECO:0000313|EMBL:BAQ97228.1}; Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:ERI84250.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_023_000G1_scaffold_647_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16674..20171
DNA (3498bp) protein (1166aa)
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:KFI42145.1}; EC=3.2.1.55 {ECO:0000313|EMBL:KFI42145.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Alpha-L-arabinofuranosidase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENE9_BIFBS
alpha-L-arabinofuranosidase
L2_023_000G1_scaffold_647_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20454..20888)
DNA (435bp) protein (145aa)
Large-conductance mechanosensitive channel n=7 Tax=Bifidobacterium RepID=E4NXR9_BIFBP
mscL; large conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_023_000G1_scaffold_647_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20942..21742
DNA (801bp) protein (267aa)
FCD domain protein n=3 Tax=Bifidobacterium bifidum RepID=U2CI99_BIFBI
yieP; putative HTH-type transcriptional regulator
FCD domain protein {ECO:0000313|EMBL:ERI84255.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_023_000G1_scaffold_647_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21846..23192
DNA (1347bp) protein (449aa)
Glutamate dehydrogenase n=6 Tax=Bifidobacterium RepID=E3ENE6_BIFBS
NADP-specific glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_023_000G1_scaffold_647_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23009..23671)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENE5_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52223.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_647_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23709..24218)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXR6_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03614.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_000G1_scaffold_647_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24498..25439
DNA (942bp) protein (314aa)
DNA integration/recombination/inversion protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXR5_BIFBP
DNA integration/recombination/inversion protein
Integrase/recombinse {ECO:0000313|EMBL:AEI97383.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_023_000G1_scaffold_647_21
unknown

Not on your lists

comp(25526..25795)
DNA (270bp) protein (90aa)

This feature has no annotations

L2_023_000G1_scaffold_647_22
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25770..26996)
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXR4_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR01692.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L2_023_000G1_scaffold_647_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27015..27962)
DNA (948bp) protein (316aa)
Type II restriction-modification system restriction subunit (EC:3.1.21.4)
Restriction endonuclease R.BbrIII {ECO:0000313|EMBL:ACO06248.1}; Type II restriction-modification system restriction subunit, PstI isoschizomer {ECO:0000313|EMBL:ABE95796.1}; EC=3.1.21.4 {ECO:0000313|EMBL:ABE95796.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Type II restriction-modification system restriction subunit n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXR3_BIFBP
L2_023_000G1_scaffold_647_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27944..29347)
DNA (1404bp) protein (468aa)
Modification methylase (EC:2.1.1.72)
Modification methylase {ECO:0000313|EMBL:ABE95797.1}; EC=2.1.1.72 {ECO:0000313|EMBL:ABE95797.1};; N6-adenosine methyltransferase M.BbrIII {ECO:0000313|EMBL:ACO06247.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Modification methylase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXR2_BIFBP
L2_023_000G1_scaffold_647_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29486..30304)
DNA (819bp) protein (273aa)
Restriction endonuclease R.BbrII n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=C1J0P6_BIFBU
restriction enzyme
Restriction endonuclease R.BbrII {ECO:0000313|EMBL:ACO06246.1}; Restriction enzyme {ECO:0000313|EMBL:ABE95798.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_023_000G1_scaffold_647_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30333..30587
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2M2F0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52218.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_647_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30830..30988
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2C1D5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI84259.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_023_000G1_scaffold_647_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31037..32188)
DNA (1152bp) protein (384aa)
Lysophospholipase L2 n=3 Tax=Bifidobacterium bifidum RepID=E4NXR0_BIFBP
putative lysophospholipase
Putative lysophospholipase {ECO:0000313|EMBL:EKF16547.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_023_000G1_scaffold_647_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32480..33685
DNA (1206bp) protein (402aa)
Transcription regulator CelR n=2 Tax=Bifidobacterium bifidum RepID=E3END7_BIFBS
Transcriptional regulator {ECO:0000313|EMBL:BAQ97218.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
transcription regulator CelR
L2_023_000G1_scaffold_647_30
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33946..34860
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=E4VCC5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:CDB22854.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
Displaying items 1-30 of 58 in total

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