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L2_023_000G1_scaffold_677

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_677_1
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..616
DNA (615bp) protein (205aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EGS0_9FIRM
L2_023_000G1_scaffold_677_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(676..1800)
DNA (1125bp) protein (375aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=2 Tax=Clostridium RepID=R6PIB9_9CLOT
L2_023_000G1_scaffold_677_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1836..2567)
DNA (732bp) protein (244aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Glucosamine-6-phosphate deaminase n=2 Tax=Clostridium RepID=B6FLH2_9CLOT
glucosamine-6-phosphate isomerase
L2_023_000G1_scaffold_677_4
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2718..4889)
DNA (2172bp) protein (724aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JKQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31032.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
methyl-accepting chemotaxis sensory transducer
L2_023_000G1_scaffold_677_5
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4916..6679)
DNA (1764bp) protein (588aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31033.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Methyl-accepting chemotaxis protein
L2_023_000G1_scaffold_677_6
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6657..7853)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AAB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ21274.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L2_023_000G1_scaffold_677_7
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7887..8639)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MU78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS74650.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
ftsE; cell division ATP-binding protein FtsE
L2_023_000G1_scaffold_677_8
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8763..9497
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MU67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS74649.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_023_000G1_scaffold_677_9
unknown

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9565..9768
DNA (204bp) protein (68aa)

This feature has no annotations

L2_023_000G1_scaffold_677_10
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9716..10072
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LXQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63293.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Response regulator
L2_023_000G1_scaffold_677_11
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10124..10525)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31037.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L2_023_000G1_scaffold_677_12
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10542..10913)
DNA (372bp) protein (124aa)
Flagellar protein FliS n=1 Tax=Dorea sp. 5-2 RepID=R9N3L1_9FIRM
Flagellar protein FliS {ECO:0000313|EMBL:EOS74647.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
flagellar protein FliS
L2_023_000G1_scaffold_677_13
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10936..13380)
DNA (2445bp) protein (815aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31039.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Flagellar capping protein
L2_023_000G1_scaffold_677_14
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13523..14308
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31040.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
ParA family protein
L2_023_000G1_scaffold_677_15
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14311..15018
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31041.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
late competence development protein ComFB
L2_023_000G1_scaffold_677_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15033..15656)
DNA (624bp) protein (208aa)
PAS domain S-box protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFT2_9FIRM
PAS domain S-box protein {ECO:0000313|EMBL:EGN34637.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Signal transduction histidine kinase
L2_023_000G1_scaffold_677_17
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15832..16173)
DNA (342bp) protein (114aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
PTS system, lactose/cellobiose family IIC component n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6W1_9FIRM
hypothetical protein
L2_023_000G1_scaffold_677_18
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16844..18109)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A044_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ21496.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
diguanylate phosphodiesterase
L2_023_000G1_scaffold_677_19
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18111..19025)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31043.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
response regulator receiver modulated CheW protein
L2_023_000G1_scaffold_677_20
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19093..19572)
DNA (480bp) protein (160aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Chemotaxis protein; stimulates methylation of MCP proteins (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK15_9FIRM
L2_023_000G1_scaffold_677_21
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19576..20196)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A4Z5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOS34464.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
chemotaxis protein CheC
L2_023_000G1_scaffold_677_22
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20213..20923)
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31046.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
flgG; flagellar basal-body rod protein FlgG
L2_023_000G1_scaffold_677_23
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20953..21693)
DNA (741bp) protein (247aa)
Flagellar hook-basal body protein n=1 Tax=Dorea sp. 5-2 RepID=R9MVC0_9FIRM
Flagellar hook-basal body protein {ECO:0000313|EMBL:EOS74636.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
fagellar hook-basal body proteins
L2_023_000G1_scaffold_677_24
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21710..22492)
DNA (783bp) protein (261aa)
RNA polymerase sigma factor n=1 Tax=Dorea sp. 5-2 RepID=R9MU62_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L2_023_000G1_scaffold_677_25
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22519..24588)
DNA (2070bp) protein (690aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK20_9FIRM
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:EGN31049.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
flagellar biosynthesis protein FlhA
L2_023_000G1_scaffold_677_26
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24592..25653)
DNA (1062bp) protein (354aa)
Flagellar biosynthetic protein FlhB n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK21_9FIRM
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:EGN31050.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
flagellar biosynthetic protein FlhB
L2_023_000G1_scaffold_677_27
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25685..26446)
DNA (762bp) protein (254aa)
Flagellar biosynthetic protein fliR n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK22_9FIRM
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
flagellar biosynthetic protein FliR
L2_023_000G1_scaffold_677_28
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26478..26732)
DNA (255bp) protein (85aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK23_9FIRM
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:EGN31052.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
export protein FliQ family 3
L2_023_000G1_scaffold_677_29
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26751..27407)
DNA (657bp) protein (219aa)
Flagellar biosynthetic protein FliP n=1 Tax=Dorea sp. 5-2 RepID=R9MU57_9FIRM
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:EOS74630.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
flagellar biosynthetic protein FliP
L2_023_000G1_scaffold_677_30
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27414..27758)
DNA (345bp) protein (115aa)
Flagellar biosynthetic protein FliO n=1 Tax=Dorea sp. 5-2 RepID=R9MU46_9FIRM
Flagellar biosynthetic protein FliO {ECO:0000313|EMBL:EOS74629.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
flagellar biosynthesis protein FliZ
Displaying items 1-30 of 51 in total

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