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L2_023_000G1_scaffold_771

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_771_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..192
DNA (192bp) protein (64aa)
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Dihydroxy-acid dehydratase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENX6_BIFBS
L2_023_000G1_scaffold_771_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(556..1452)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GM49_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42691.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_023_000G1_scaffold_771_3
unknown

Not on your lists

1616..1726
DNA (111bp) protein (37aa)

This feature has no annotations

L2_023_000G1_scaffold_771_4
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1754..4459)
DNA (2706bp) protein (902aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
acnA; aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase n=4 Tax=Bifidobacterium RepID=K2IR15_BIFBI
L2_023_000G1_scaffold_771_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4532..7072)
DNA (2541bp) protein (847aa)
E1-E2 ATPase n=2 Tax=Bifidobacterium bifidum RepID=E4V8P8_BIFBI
E1-E2 ATPase {ECO:0000313|EMBL:EFR49990.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
ctpE; putative cation-transporting ATPase E
L2_023_000G1_scaffold_771_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7370..7984)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V8P7_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR49989.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_023_000G1_scaffold_771_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7989..9251)
DNA (1263bp) protein (421aa)
tRNA (Uracil-5-) -methyltransferase (EC:2.1.1.35)
TRAM domain protein n=3 Tax=Bifidobacterium RepID=E4V8P6_BIFBI
TRAM domain protein {ECO:0000313|EMBL:ERI83086.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ97816.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_023_000G1_scaffold_771_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9277..10050)
DNA (774bp) protein (258aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENX0_BIFBS
hypothetical protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ADO52845.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_771_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10090..10911)
DNA (822bp) protein (274aa)
Uncharacterized protein n=5 Tax=Bifidobacterium bifidum RepID=I3WH30_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52844.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_771_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11051..11908)
DNA (858bp) protein (286aa)
xth; exodeoxyribonuclease III (EC:3.1.11.2)
Putative exodeoxyribonuclease III n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V8P3_BIFBI
Putative exodeoxyribonuclease III {ECO:0000313|EMBL:EFR49985.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_023_000G1_scaffold_771_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12051..13481
DNA (1431bp) protein (477aa)
pepC; aminopeptidase C (EC:3.4.22.40)
Aminopeptidase C n=4 Tax=Bifidobacterium RepID=I3WH28_BIFBI
Aminopeptidase C {ECO:0000313|EMBL:CDB22730.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_000G1_scaffold_771_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13677..15467)
DNA (1791bp) protein (597aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DTI7_BIFBI
OppA Oligopeptide-binding protein {ECO:0000313|EMBL:KFI42683.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
oppA; oligopeptide-binding protein OppA
L2_023_000G1_scaffold_771_13
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15631..17847)
DNA (2217bp) protein (739aa)
oppD; oligopeptide transport ATP-binding protein OppD (EC:3.6.3.24)
Putative phosphonate C-P lyase system protein PhnK n=2 Tax=Bifidobacterium bifidum RepID=U2CEW7_BIFBI
OppD Oligopeptide transport ATP-binding protein {ECO:0000313|EMBL:CDB22728.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_000G1_scaffold_771_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17847..18791)
DNA (945bp) protein (315aa)
Putative oligopeptide ABC transporter, permease protein OppC n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BXY4_BIFBI
OppC Oligopeptide transport system permease protein {ECO:0000313|EMBL:KFI42681.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
oppC; oligopeptide transport system permease protein oppC
L2_023_000G1_scaffold_771_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18813..19796)
DNA (984bp) protein (328aa)
Peptide/nickel transport system, permease protein n=7 Tax=Bifidobacterium RepID=E3ENW3_BIFBS
oppB; oligopeptide transport system permease protein OppB
Putative peptide transport permease protein {ECO:0000313|EMBL:EKF15846.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_023_000G1_scaffold_771_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20204..21208)
DNA (1005bp) protein (335aa)
Tyrosine recombinase XerC n=4 Tax=Bifidobacterium RepID=E4V8N7_BIFBI
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
xerC; tyrosine recombinase
L2_023_000G1_scaffold_771_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21294..21545
DNA (252bp) protein (84aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WH22_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52836.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_771_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21619..22482)
DNA (864bp) protein (288aa)
Prephenate dehydrogenase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENW0_BIFBS
tyrA1; prephenate dehydrogenase
Prephenate dehydrogenase {ECO:0000313|EMBL:ADO52835.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_771_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22650..23681)
DNA (1032bp) protein (344aa)
Chorismate mutase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENV9_BIFBS
chorismate mutase
Chorismate mutase {ECO:0000313|EMBL:ADO52834.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_771_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23678..24199)
DNA (522bp) protein (174aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0S8_BIFBP
hypothetical protein
Membrane spanning protein {ECO:0000313|EMBL:KFI42675.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_023_000G1_scaffold_771_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24837..26759)
DNA (1923bp) protein (641aa)
GTP-binding protein TypA/BipA n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENV7_BIFBS
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:ADO52832.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
GTP-binding protein TypA/BipA
L2_023_000G1_scaffold_771_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26940..28217)
DNA (1278bp) protein (426aa)
Cysteine desulfurase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENV6_BIFBS
iscS; cysteine desulfurase
Cysteine desulfurase {ECO:0000313|EMBL:ADO52831.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_771_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28220..29113)
DNA (894bp) protein (298aa)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENV5_BIFBS
nadC; nicotinate-nucleotide pyrophosphorylase
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:ADO52830.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_771_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29247..30896)
DNA (1650bp) protein (550aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L-aspartate oxidase n=4 Tax=Bifidobacterium bifidum RepID=E3ENV4_BIFBS
nadB; L-aspartate oxidase
L2_023_000G1_scaffold_771_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30949..32229)
DNA (1281bp) protein (427aa)
nadA; quinolinate synthetase A NadA (EC:2.5.1.72)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Quinolinate synthase A n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0S3_BIFBP
L2_023_000G1_scaffold_771_26
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32347..33129)
DNA (783bp) protein (261aa)
phosphohydrolase (EC:3.6.1.13)
Phosphohydrolase (MutT/nudix family protein) n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0S2_BIFBP
Phosphohydrolase (MutT/nudix family protein) {ECO:0000313|EMBL:CDB22714.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_000G1_scaffold_771_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33333..33905)
DNA (573bp) protein (191aa)
Segregation and condensation protein B n=3 Tax=Bifidobacterium bifidum RepID=E3ENV1_BIFBS
scpB; segregation and condensation protein ScpB
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_023_000G1_scaffold_771_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34002..34856)
DNA (855bp) protein (285aa)
Segregation and condensation protein A n=3 Tax=Bifidobacterium RepID=I3WH11_BIFBI
scpA; segregation and condensation protein A
Segregation and condensation protein A {ECO:0000313|EMBL:AFL04174.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_000G1_scaffold_771_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34893..35912)
DNA (1020bp) protein (340aa)
Chromosome partitioning protein n=5 Tax=Bifidobacterium bifidum RepID=E3ENU9_BIFBS
chromosome partitioning protein
Chromosome partitioning protein {ECO:0000313|EMBL:ADO52824.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_771_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35974..36942)
DNA (969bp) protein (323aa)
Tyrosine recombinase XerD n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H956_BIFBI
integrase/recombinase
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Displaying items 1-30 of 64 in total

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