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L2_023_000G1_scaffold_869

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_869_1
unknown

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)

This feature has no annotations

L2_023_000G1_scaffold_869_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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562..3246
DNA (2685bp) protein (895aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGC2_9FIRM
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EGJ45726.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
calcium-translocating P-type ATPase
L2_023_000G1_scaffold_869_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3319..4323)
DNA (1005bp) protein (335aa)
DNA replication protein DnaC n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEB9_9FIRM
DNA replication protein DnaC {ECO:0000313|EMBL:EGJ46419.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_000G1_scaffold_869_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4328..5281)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46420.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_000G1_scaffold_869_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

5740..6315
DNA (576bp) protein (192aa)
5'-nucleotidase YfbR (EC:3.1.3.5)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YGT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14416.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L2_023_000G1_scaffold_869_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6376..6645
DNA (270bp) protein (90aa)
UPF0237 protein HMPREF0866_01546 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEM6_9FIRM
UPF0237 protein HMPREF0866_01546 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_000G1_scaffold_869_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6854..8212
DNA (1359bp) protein (453aa)
UPF0210 protein HMPREF0866_01547 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEM7_9FIRM
UPF0210 protein HMPREF0866_01547 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_000G1_scaffold_869_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8818..9891
DNA (1074bp) protein (358aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEG3_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hrcA; heat-inducible transcription repressor HrcA
L2_023_000G1_scaffold_869_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9907..10473
DNA (567bp) protein (189aa)
Protein GrpE n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEG4_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
grpE; GrpE protein
L2_023_000G1_scaffold_869_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10562..12418
DNA (1857bp) protein (619aa)
Chaperone protein DnaK n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEG5_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dnaK; chaperone protein DnaK
L2_023_000G1_scaffold_869_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12613..13773
DNA (1161bp) protein (387aa)
Chaperone protein DnaJ n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEG6_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dnaJ; chaperone protein DnaJ
L2_023_000G1_scaffold_869_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13855..15513)
DNA (1659bp) protein (553aa)
Ribonuclease J n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEZ7_9FIRM
Ribonuclease J {ECO:0000313|EMBL:EGJ46017.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ribonuclease J
L2_023_000G1_scaffold_869_13
unknown

Not on your lists

15686..16216
DNA (531bp) protein (177aa)

This feature has no annotations

L2_023_000G1_scaffold_869_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16179..16511
DNA (333bp) protein (111aa)
Arsenate reductase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEZ8_9FIRM
Arsenate reductase {ECO:0000313|EMBL:EGJ46018.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Arsenate reductase and related proteins, glutaredoxin family
L2_023_000G1_scaffold_869_15
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

16536..17531
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YED9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14703.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_023_000G1_scaffold_869_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17562..18242
DNA (681bp) protein (227aa)
Two-component system, OmpR family, response regulator ResD n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEZ9_9FIRM
Two-component system, OmpR family, response regulator ResD {ECO:0000313|EMBL:EGJ46019.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_023_000G1_scaffold_869_17
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

18465..19409
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XYL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14774.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
2-hydroxyacid dehydrogenase
L2_023_000G1_scaffold_869_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19694..20743
DNA (1050bp) protein (350aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFA0_9FIRM
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EGJ46120.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_023_000G1_scaffold_869_19
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20759..21304
DNA (546bp) protein (182aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R4E7_CLOSW
deaminase/reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADL05017.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_023_000G1_scaffold_869_20
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

21301..22107
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XYK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14769.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_023_000G1_scaffold_869_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22389..24497
DNA (2109bp) protein (703aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF98_9FIRM
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EGJ46118.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_023_000G1_scaffold_869_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24616..25005
DNA (390bp) protein (130aa)
C_GCAxxG_C_C family protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF99_9FIRM
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:EGJ46119.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
C_GCAxxG_C_C family protein
L2_023_000G1_scaffold_869_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25054..25638)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46116.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_000G1_scaffold_869_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25635..26690)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46115.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
baseplate J-like family protein
L2_023_000G1_scaffold_869_25
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26703..27056)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M669_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66191.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L2_023_000G1_scaffold_869_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27067..27468)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46113.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_023_000G1_scaffold_869_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27515..28465)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46112.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_000G1_scaffold_869_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28462..29028)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46111.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_000G1_scaffold_869_29
unknown

Not on your lists

comp(29042..29692)
DNA (651bp) protein (217aa)

This feature has no annotations

L2_023_000G1_scaffold_869_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29689..29898)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46109.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Displaying items 1-30 of 56 in total

View Taxonomy