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L2_023_015G1_scaffold_45

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Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_015G1_scaffold_45_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(131..1000)
DNA (870bp) protein (290aa)
Protein-export membrane protein SecF n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA31_CLOBU
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
secF; protein translocase subunit SecF
L2_023_015G1_scaffold_45_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(993..2252)
DNA (1260bp) protein (420aa)
Protein translocase subunit SecD n=3 Tax=Clostridium butyricum RepID=C4IKT8_CLOBU
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
secD; protein translocase subunit SecD
L2_023_015G1_scaffold_45_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2638..3012)
DNA (375bp) protein (125aa)
UPI000399FD18 related cluster n=1 Tax=unknown RepID=UPI000399FD18
Membrane protein {ECO:0000313|EMBL:ETI91035.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
membrane protein
L2_023_015G1_scaffold_45_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3171..3455)
DNA (285bp) protein (95aa)
Preprotein translocase, YajC subunit n=3 Tax=Clostridium butyricum RepID=B1QXT5_CLOBU
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KJZ83700.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
preprotein translocase, YajC subunit
L2_023_015G1_scaffold_45_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3724..4860)
DNA (1137bp) protein (379aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QXT4_CLOBU
L2_023_015G1_scaffold_45_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5054..6181)
DNA (1128bp) protein (376aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Clostridium butyricum RepID=M8JKY6_CLOBU
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
L2_023_015G1_scaffold_45_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6237..7280)
DNA (1044bp) protein (348aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Holliday junction ATP-dependent DNA helicase RuvB n=4 Tax=Clostridium butyricum RepID=B1QXT2_CLOBU
ruvB; Holliday junction DNA helicase RuvB
L2_023_015G1_scaffold_45_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7427..8029)
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
UPI0003D5DC84 related cluster n=1 Tax=unknown RepID=UPI0003D5DC84
ruvA; Holliday junction DNA helicase RuvA
L2_023_015G1_scaffold_45_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8223..8801)
DNA (579bp) protein (193aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXT0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83692.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_023_015G1_scaffold_45_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8908..9498)
DNA (591bp) protein (197aa)
Rubrerythrin n=3 Tax=Clostridium butyricum RepID=B1QXS9_CLOBU
Rubrerythrin {ECO:0000313|EMBL:KJZ83694.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rbr; rubrerythrin
L2_023_015G1_scaffold_45_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9587..10456)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA38_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33258.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
radical SAM domain protein
L2_023_015G1_scaffold_45_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10656..10895)
DNA (240bp) protein (80aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QXS7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33259.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_023_015G1_scaffold_45_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11515..13347
DNA (1833bp) protein (611aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
1,4-alpha-glucan branching enzyme n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0R0_CLOBU
Carbohydrate-Binding Module Family 48 protein / Glycoside Hydrolase Family 13 protein
L2_023_015G1_scaffold_45_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13414..14082)
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8JBU4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85339.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_023_015G1_scaffold_45_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14202..14765)
DNA (564bp) protein (188aa)
Accessory gene regulator B superfamily n=2 Tax=Clostridium butyricum RepID=B1QXS4_CLOBU
Putative accessory gene regulator protein B {ECO:0000313|EMBL:EEP54917.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
accessory gene regulator B
L2_023_015G1_scaffold_45_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14857..16077)
DNA (1221bp) protein (407aa)
Lysine-N-methylase {ECO:0000313|EMBL:KJZ85325.1}; EC=2.1.1.- {ECO:0000313|EMBL:KJZ85325.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
fliB; flagellin lysine-N-methylase FliB (EC:2.1.1.-)
FliB family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKX4_CLOBU
L2_023_015G1_scaffold_45_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16650..16982)
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QXS1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85351.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_023_015G1_scaffold_45_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17193..20522)
DNA (3330bp) protein (1110aa)
Tetratricopeptide repeat domain protein n=2 Tax=Clostridium butyricum RepID=B1QXS0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85323.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_023_015G1_scaffold_45_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20799..21821)
DNA (1023bp) protein (341aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
lyc; autolytic lysozyme Lyc (EC:3.2.1.17)
Cell wall binding repeat domain protein n=2 Tax=Clostridium butyricum RepID=B1QXR9_CLOBU
L2_023_015G1_scaffold_45_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21982..23037)
DNA (1056bp) protein (352aa)
D-galactose-binding periplasmic protein n=2 Tax=Clostridium butyricum RepID=B1QXR7_CLOBU
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB {ECO:0000313|EMBL:KJZ85340.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
mglB1; D-galactose-binding periplasmic protein MglB
L2_023_015G1_scaffold_45_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23240..23908
DNA (669bp) protein (223aa)
UPI0003D65E1A related cluster n=1 Tax=unknown RepID=UPI0003D65E1A
Uncharacterized protein {ECO:0000313|EMBL:KJZ85355.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_023_015G1_scaffold_45_22
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24007..25980)
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0R7_CLOBU
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KJZ87434.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
methyl-accepting chemotaxis sensory transducer
L2_023_015G1_scaffold_45_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26768..26923)
DNA (156bp) protein (52aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QXR4_CLOBU
Conserved domain protein {ECO:0000313|EMBL:EEP54735.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative zinc-binding domain-containing protein
L2_023_015G1_scaffold_45_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27445..28173)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKW0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EQF26938.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
L2_023_015G1_scaffold_45_25
Exiguobacterium pavilionensis, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28177..28440)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7H2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ERG66111.1}; TaxID=1345023 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium pavilionensis RW-2.;"
hypothetical protein
L2_023_015G1_scaffold_45_26
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28677..28832)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKV0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:AJG98302.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L2_023_015G1_scaffold_45_27
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28879..29061)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MMH0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF55941.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_023_015G1_scaffold_45_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29645..30646)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS69_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33335.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
GGGtGRT protein
L2_023_015G1_scaffold_45_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30672..31364)
DNA (693bp) protein (231aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS70_CLOBU
No significant {ECO:0000313|EMBL:KJZ85327.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_023_015G1_scaffold_45_30
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

32318..34510
DNA (2193bp) protein (731aa)
S-formylglutathione hydrolase (EC:3.1.2.12)
Uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDM4_FUSMR
Uncharacterized protein {ECO:0000313|EMBL:EEO35980.1}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
Displaying items 1-30 of 66 in total

View Taxonomy