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L2_023_015G1_scaffold_140

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_015G1_scaffold_140_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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292..1641
DNA (1350bp) protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pgi; glucose-6-phosphate isomerase Pgi (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=5 Tax=Clostridium butyricum RepID=B1R095_CLOBU
L2_023_015G1_scaffold_140_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1647..2093
DNA (447bp) protein (149aa)
UPF0178 protein CBY_3059 n=2 Tax=Clostridium butyricum RepID=B1R096_CLOBU
UPF0178 protein CLP_3835 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein DUF188
L2_023_015G1_scaffold_140_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2313..4730
DNA (2418bp) protein (806aa)
Two component regulator three Y motif protein n=2 Tax=Clostridium butyricum RepID=B1R097_CLOBU
Two component regulator three Y domain protein {ECO:0000313|EMBL:EEP55456.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Y_Y_Y domain containing protein
L2_023_015G1_scaffold_140_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4785..5618
DNA (834bp) protein (278aa)
Lytic murein transglycosylase n=2 Tax=Clostridium butyricum RepID=B1R098_CLOBU
Lytic transglycosylase {ECO:0000313|EMBL:KHD14252.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
lytic transglycosylase catalytic
L2_023_015G1_scaffold_140_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5866..6582
DNA (717bp) protein (239aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ytzG1; RNA pseudouridine synthase YtzG (EC:5.4.99.-)
Pseudouridine synthase n=2 Tax=Clostridium butyricum RepID=B1R099_CLOBU
L2_023_015G1_scaffold_140_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7175..9448
DNA (2274bp) protein (758aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium butyricum 5521 RepID=B1R0A0_CLOBU
L2_023_015G1_scaffold_140_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9624..11615
DNA (1992bp) protein (664aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ligA; DNA ligase LigA (EC:6.5.1.2)
UPI0003D6587F related cluster n=1 Tax=unknown RepID=UPI0003D6587F
L2_023_015G1_scaffold_140_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11620..11892
DNA (273bp) protein (91aa)
UPI0003D60D70 related cluster n=1 Tax=unknown RepID=UPI0003D60D70
Uncharacterized protein {ECO:0000313|EMBL:KHD14248.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_023_015G1_scaffold_140_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12165..12455
DNA (291bp) protein (97aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
gatC1; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=2 Tax=Clostridium butyricum RepID=B1R0A2_CLOBU
L2_023_015G1_scaffold_140_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12477..13934
DNA (1458bp) protein (486aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-)
UPI00039D444D related cluster n=1 Tax=unknown RepID=UPI00039D444D
L2_023_015G1_scaffold_140_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13954..15384
DNA (1431bp) protein (477aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=Clostridium butyricum RepID=B1R0A4_CLOBU
L2_023_015G1_scaffold_140_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15439..15741)
DNA (303bp) protein (101aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0A5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83350.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_023_015G1_scaffold_140_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15945..17432
DNA (1488bp) protein (496aa)
Bacterial extracellular solute-binding protein, family 5 superfamily n=2 Tax=Clostridium butyricum RepID=B1R0A6_CLOBU
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:EEP55291.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
peptide ABC transporter periplasmic protein
L2_023_015G1_scaffold_140_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17438..19231)
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YS37_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55574.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_023_015G1_scaffold_140_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19326..20303
DNA (978bp) protein (326aa)
Hydrogenase maturation factor n=2 Tax=Clostridium butyricum RepID=B1R0A8_CLOBU
Hydrogenase maturation factor {ECO:0000313|EMBL:EEP55167.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
AIR synthase-like protein
L2_023_015G1_scaffold_140_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20375..20989
DNA (615bp) protein (205aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Non-canonical purine NTP pyrophosphatase (EC:3.6.1.19)
Non-canonical purine NTP pyrophosphatase n=2 Tax=Clostridium butyricum RepID=B1R0A9_CLOBU
L2_023_015G1_scaffold_140_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21012..21497
DNA (486bp) protein (162aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ysnB; putative metallophosphoesterase YsnB (EC:3.1.4.-)
Ser/Thr protein phosphatase family protein n=3 Tax=Clostridium butyricum RepID=B1R0B0_CLOBU
Displaying 17 items

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