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L2_023_015G1_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_015G1_scaffold_68_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(63..251)
DNA (189bp) protein (63aa)
Ferredoxin n=6 Tax=Clostridium perfringens RepID=H7CZL6_CLOPF
ferredoxin
Ferredoxin [3Fe-4S] {ECO:0000313|EMBL:BAB82217.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_023_015G1_scaffold_68_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(397..1251)
DNA (855bp) protein (285aa)
Protein mrp homolog n=10 Tax=Clostridium perfringens RepID=MRP_CLOPE
ATPase
Mrp/NBP35 ATP-binding family protein {ECO:0000313|EMBL:EDT15379.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_68_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1272..2111)
DNA (840bp) protein (280aa)
Putative lipoprotein n=3 Tax=Clostridium perfringens RepID=B1RRX7_CLOPF
Putative lipoprotein {ECO:0000313|EMBL:EDT72873.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
lipoprotein
L2_023_015G1_scaffold_68_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2101..2871)
DNA (771bp) protein (257aa)
Prolipoprotein diacylglyceryl transferase 2 {ECO:0000255|HAMAP-Rule:MF_01147}; EC=2.4.99.- {ECO:0000255|HAMAP-Rule:MF_01147};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Prolipoprotein diacylglyceryl transferase 2 n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=LGT2_CLOPE
prolipoprotein diacylglyceryl transferase
L2_023_015G1_scaffold_68_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2974..3564)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMD8_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86907.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_023_015G1_scaffold_68_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3696..5285)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHS4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS80714.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_023_015G1_scaffold_68_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5385..6242)
DNA (858bp) protein (286aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Ribosomal RNA small subunit methyltransferase A n=8 Tax=Clostridium perfringens RepID=RSMA_CLOP1
L2_023_015G1_scaffold_68_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6254..6802)
DNA (549bp) protein (183aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Ribonuclease M5 n=7 Tax=Clostridium perfringens RepID=H7CZM3_CLOPF
primase-like protein
L2_023_015G1_scaffold_68_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6937..7959)
DNA (1023bp) protein (341aa)
3D/G5 domain-containing protein n=4 Tax=Clostridium perfringens RepID=H7CZM4_CLOPF
hypothetical protein
3D/G5 domain-containing protein {ECO:0000313|EMBL:EIA15824.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_023_015G1_scaffold_68_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8203..8973)
DNA (771bp) protein (257aa)
Hydrolase, TatD family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMD3_CLOP1
TatD family hydrolase
Hydrolase, TatD family protein {ECO:0000313|EMBL:EIA15825.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_023_015G1_scaffold_68_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8992..10491)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFP4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27172.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_023_015G1_scaffold_68_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10593..11273
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVK0_CLOPF
cyclic nucleotide-binding domain-containing protein
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDT15386.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_68_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11536..13080)
DNA (1545bp) protein (515aa)
Methionyl-tRNA synthetase {ECO:0000313|EMBL:EDS80621.1}; EC=6.1.1.10 {ECO:0000313|EMBL:EDS80621.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Methionine-tRNA ligase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVK1_CLOPF
Methionyl-tRNA synthetase suspected. See adjacent gene [L2_023_015G1_scaffold_68_14].
metS; methionyl-tRNA synthetase
L2_023_015G1_scaffold_68_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13181..15118)
DNA (1938bp) protein (646aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Clostridium perfringens RepID=B1BSD7_CLOPF
L2_023_015G1_scaffold_68_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15609..16190
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVK3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80618.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_023_015G1_scaffold_68_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16225..16734
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVK4_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT15409.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_68_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16774..18489)
DNA (1716bp) protein (572aa)
Na+/H+ antiporter family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHR3_CLOPF
Na(+)/H(+) antiporter family protein
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EDS80665.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_023_015G1_scaffold_68_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18915..20528)
DNA (1614bp) protein (538aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVK6_CLOPF
ABC1 domain protein {ECO:0000313|EMBL:EDS80614.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_023_015G1_scaffold_68_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20668..21006)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CZN4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA15834.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_023_015G1_scaffold_68_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21115..22359)
DNA (1245bp) protein (415aa)
pepP; xaa-pro aminopeptidase (EC:3.4.11.9)
Xaa-pro aminopeptidase {ECO:0000313|EMBL:EDT72860.1}; EC=3.4.11.9 {ECO:0000313|EMBL:EDT72860.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Xaa-pro aminopeptidase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZW1_CLOPF
L2_023_015G1_scaffold_68_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22507..25104)
DNA (2598bp) protein (866aa)
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase n=8 Tax=Clostridium perfringens RepID=H7CZN6_CLOPF
adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_023_015G1_scaffold_68_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25533..26051)
DNA (519bp) protein (173aa)
Spore maturation protein B n=3 Tax=Clostridium perfringens RepID=H7CZN7_CLOPF
spore maturation protein B
Spore maturation protein B {ECO:0000313|EMBL:EIA15837.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_023_015G1_scaffold_68_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26063..26641)
DNA (579bp) protein (193aa)
Spore maturation protein A n=3 Tax=Clostridium perfringens RepID=H7CZN8_CLOPF
spmA; spore maturation protein A
Spore maturation protein A {ECO:0000313|EMBL:EIA15838.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_023_015G1_scaffold_68_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26756..26935
DNA (180bp) protein (60aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CZN9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15370.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_68_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26975..28342)
DNA (1368bp) protein (456aa)
MATE efflux family protein n=2 Tax=Clostridium perfringens RepID=B1RRZ9_CLOPF
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:EIA15840.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_023_015G1_scaffold_68_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28530..29162)
DNA (633bp) protein (211aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CZP1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15841.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_023_015G1_scaffold_68_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29275..29967)
DNA (693bp) protein (231aa)
Membrane protein n=5 Tax=Clostridium perfringens RepID=Q0TMB5_CLOP1
membrane protein
Membrane protein {ECO:0000313|EMBL:EDT15341.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_68_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29971..30399)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQ13_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85509.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_023_015G1_scaffold_68_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30504..31502)
DNA (999bp) protein (333aa)
Catabolite control protein A n=10 Tax=Clostridium perfringens RepID=H1CVL7_CLOPF
catabolite control protein A
Putative catabolite control protein A {ECO:0000313|EMBL:EDT15334.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_68_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31834..32163
DNA (330bp) protein (110aa)
Rhodanese-like domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CZP5_CLOPF
rhodanese-like domain-containing protein
Rhodanese-like domain protein {ECO:0000313|EMBL:EDT27184.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Displaying items 1-30 of 45 in total

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