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L2_023_015G1_scaffold_108

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_015G1_scaffold_108_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1023)
DNA (1023bp) protein (341aa)
Probable iron-uptake ABC transporter n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN99_CLOPE
iron-uptake ABC transporter
Probable iron-uptake ABC transporter {ECO:0000313|EMBL:BAB80145.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_023_015G1_scaffold_108_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1023..2120)
DNA (1098bp) protein (366aa)
Iron compound ABC transporter, iron compound-binding protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGQ6_CLOPF
Iron compound ABC transporter, iron compound-binding protein {ECO:0000313|EMBL:EDS80885.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ion-uptake ABC transporter
L2_023_015G1_scaffold_108_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2371..3708)
DNA (1338bp) protein (446aa)
CBS/transporter associated domain protein n=4 Tax=Clostridium perfringens RepID=Q0TTZ4_CLOP1
CBS/transporter associated domain-containing protein
CBS/transporter associated domain protein {ECO:0000313|EMBL:EDT24997.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_023_015G1_scaffold_108_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4254..4670
DNA (417bp) protein (139aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CSM4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16663.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_108_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4676..5011
DNA (336bp) protein (112aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CSM3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80141.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_023_015G1_scaffold_108_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5070..5558)
DNA (489bp) protein (163aa)
Acetyltransferase n=1 Tax=Clostridium perfringens F262 RepID=H7CSM2_CLOPF
Acetyltransferase {ECO:0000313|EMBL:EIA18397.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
acetyltransferase
L2_023_015G1_scaffold_108_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5916..7211)
DNA (1296bp) protein (432aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNM7_CLOPF
Putative lipoprotein {ECO:0000313|EMBL:EDT16737.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
lipoprotein
L2_023_015G1_scaffold_108_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7298..8137)
DNA (840bp) protein (280aa)
Hydrolase, alpha/beta fold family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGQ0_CLOPF
Hydrolase, alpha/beta fold family {ECO:0000313|EMBL:EDS81023.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
alpha/beta hydrolase
L2_023_015G1_scaffold_108_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8419..9261)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDI5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27875.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_023_015G1_scaffold_108_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9467..10009
DNA (543bp) protein (181aa)
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Signal peptidase I n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUA5_CLOPF
L2_023_015G1_scaffold_108_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10097..10624)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUA6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16806.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_023_015G1_scaffold_108_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10893..11048)
DNA (156bp) protein (52aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CSL6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27965.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_023_015G1_scaffold_108_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11111..11698)
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XNB1_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80133.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_023_015G1_scaffold_108_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12171..13454)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R448_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT25045.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L2_023_015G1_scaffold_108_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13908..14306
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CSL3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18388.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_023_015G1_scaffold_108_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14444..15103)
DNA (660bp) protein (220aa)
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNW5_CLOPF
L2_023_015G1_scaffold_108_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15218..17830)
DNA (2613bp) protein (871aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Helicase, UvrD/REP/exonuclease family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNN7_CLOPF
helicase, UvrD/REP/exonuclease
L2_023_015G1_scaffold_108_18
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17995..19068)
DNA (1074bp) protein (358aa)
Transposase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KLD9_9CLOT
Transposase {ECO:0000313|EMBL:CDB74320.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
transposase
L2_023_015G1_scaffold_108_19
Acholeplasma brassicae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(19107..19370)
DNA (264bp) protein (88aa)
Transposase, IS200-family protein n=1 Tax=Acholeplasma brassicae RepID=U4KT65_9MOLU
Transposase, IS200-family protein
Transposase, IS200-family protein {ECO:0000313|EMBL:CCV66149.1}; TaxID=61635 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma brassicae.;"
L2_023_015G1_scaffold_108_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19792..21078)
DNA (1287bp) protein (429aa)
Major facilitator family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNW7_CLOPF
Major facilitator family protein {ECO:0000313|EMBL:EDS80895.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
major facilitator family protein
L2_023_015G1_scaffold_108_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21169..21906)
DNA (738bp) protein (246aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNN9_CLOPF
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EDT16758.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
glycerophosphoryl diester phosphodiesterase
L2_023_015G1_scaffold_108_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22473..23264)
DNA (792bp) protein (264aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Clostridium perfringens F262 RepID=H7CSK8_CLOPF
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EIA18383.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_023_015G1_scaffold_108_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23275..24930)
DNA (1656bp) protein (552aa)
PTS system transporter subunit IIBC (EC:2.7.1.69)
PTS system, IIBC component n=2 Tax=Clostridium perfringens RepID=Q0TU11_CLOP1
Probable PTS system {ECO:0000313|EMBL:BAB80125.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_023_015G1_scaffold_108_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25108..26772)
DNA (1665bp) protein (555aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUB7_CLOPF
oligo-1,6-glucosidase
L2_023_015G1_scaffold_108_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27085..28077)
DNA (993bp) protein (331aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNP3_CLOPF
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDT16601.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
LacI family transcriptional regulator
Displaying 25 items

View Taxonomy