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L2_023_015G1_scaffold_135

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_015G1_scaffold_135_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(73..1905)
DNA (1833bp) protein (611aa)
GTP-binding protein TypA n=5 Tax=Clostridium perfringens RepID=Q0TPI0_CLOP1
GTP-binding protein TypA {ECO:0000313|EMBL:EDT22791.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
typA; GTP-binding protein TypA
L2_023_015G1_scaffold_135_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2062..3807)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XJI1_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81481.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_023_015G1_scaffold_135_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3800..4252)
DNA (453bp) protein (151aa)
FUR family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CXH1_CLOPF
FUR family transcriptional regulator
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDT13506.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_135_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4273..4527)
DNA (255bp) protein (85aa)
UPF0473 protein CPR_1747 n=9 Tax=Clostridium perfringens RepID=Y1747_CLOPS
hypothetical protein
UPF0473 protein HA1_10696 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_023_015G1_scaffold_135_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4543..4956)
DNA (414bp) protein (138aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Putative Holliday junction resolvase n=10 Tax=Clostridium perfringens RepID=RUVX_CLOP1
Holliday junction resolvase-like protein
L2_023_015G1_scaffold_135_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5004..5261)
DNA (258bp) protein (86aa)
UPF0297 protein CPR_1749 n=10 Tax=Clostridium perfringens RepID=Y1749_CLOPS
hypothetical protein
UPF0297 protein AC3_2258 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_135_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5405..8044)
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_00036};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=SYA_CLOPS
L2_023_015G1_scaffold_135_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8519..9559)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3M9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT71522.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_023_015G1_scaffold_135_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9585..10070)
DNA (486bp) protein (162aa)
PRC-barrel domain protein n=9 Tax=Clostridium perfringens RepID=Q0TPH3_CLOP1
PRC-barrel domain-containing protein
PRC-barrel domain protein {ECO:0000313|EMBL:EDT13507.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_135_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10347..11399)
DNA (1053bp) protein (351aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000255|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000255|HAMAP-Rule:MF_00144};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
tRNA-specific 2-thiouridylase MnmA n=6 Tax=Clostridium perfringens RepID=MNMA_CLOP1
L2_023_015G1_scaffold_135_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11451..11879)
DNA (429bp) protein (143aa)
FeS cluster assembly scaffold protein NifU n=11 Tax=Clostridium perfringens RepID=Q0SS38_CLOPS
nifU; nifU protein
FeS cluster assembly scaffold protein NifU {ECO:0000313|EMBL:EDT26482.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_023_015G1_scaffold_135_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11882..13078)
DNA (1197bp) protein (399aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Cysteine desulfurase n=6 Tax=Clostridium perfringens RepID=H7CXI0_CLOPF
L2_023_015G1_scaffold_135_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13071..13532)
DNA (462bp) protein (154aa)
Rrf2 family protein n=4 Tax=Clostridium perfringens RepID=Q0TPG9_CLOP1
rrf2 family protein
Rrf2 family protein {ECO:0000313|EMBL:EDT71524.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_023_015G1_scaffold_135_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13854..15080)
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSC2_CLOPF
ATPase, AAA family {ECO:0000313|EMBL:EDT23284.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
recombination factor protein RarA
L2_023_015G1_scaffold_135_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15305..16204)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJG8_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81494.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_023_015G1_scaffold_135_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16392..16820)
DNA (429bp) protein (143aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CXI4_CLOPF
MOSC domain protein {ECO:0000313|EMBL:EDS80325.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_023_015G1_scaffold_135_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16823..17794)
DNA (972bp) protein (324aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000255|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000255|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000255|HAMAP-Rule:MF_01225}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSC5_CLOPF
moaA; molybdenum cofactor biosynthesis protein A
L2_023_015G1_scaffold_135_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17898..18911)
DNA (1014bp) protein (338aa)
Molybdenum cofactor synthesis domain-containing protein n=6 Tax=Clostridium perfringens RepID=H1CSC6_CLOPF
molybdenum cofactor biosynthesis protein
Putative molybdenum cofactor biosynthesis protein {ECO:0000313|EMBL:EIA16641.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_023_015G1_scaffold_135_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19030..19626)
DNA (597bp) protein (199aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000255|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000255|HAMAP-Rule:MF_00316}; Short=MGD synthase {ECO:0000255|HAMAP-Rule:MF_00316};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=MOBA_CLOP1
molybdopterin-guanine dinucleotide biosynthesis protein
L2_023_015G1_scaffold_135_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19671..20891)
DNA (1221bp) protein (407aa)
Molybdenum cofactor biosynthesis protein MoeA n=2 Tax=Clostridium perfringens RepID=B1BJ66_CLOPF
Molybdenum cofactor biosynthesis protein MoeA {ECO:0000313|EMBL:EDS80415.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
molybdenum cofactor biosynthesis protein MoeA
L2_023_015G1_scaffold_135_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21230..21712)
DNA (483bp) protein (161aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B n=5 Tax=Clostridium perfringens RepID=B1R915_CLOPF
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:EDT71517.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
mobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB
L2_023_015G1_scaffold_135_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21792..23015)
DNA (1224bp) protein (408aa)
Nitrate reductase, NADH oxidase subunit n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RM61_CLOPF
Nitrate reductase, NADH oxidase subunit {ECO:0000313|EMBL:EDT71525.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
noxA; nitrate reductase, NADH oxidase subunit
L2_023_015G1_scaffold_135_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23017..23370)
DNA (354bp) protein (118aa)
Nitrate reductase electron transfer subunit n=9 Tax=Clostridium perfringens RepID=I1SBA8_CLOPE
narB; nitrate reductase electron transfer subunit
Nitrate reductase electron transfer subunit {ECO:0000313|EMBL:EDT26347.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Displaying 23 items

View Taxonomy