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L2_023_015G1_scaffold_148

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_015G1_scaffold_148_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1913)
DNA (1911bp) protein (637aa)
ATPase, P-type , HAD superfamily, subfamily IC {ECO:0000313|EMBL:EDT27695.1}; EC=3.6.3.- {ECO:0000313|EMBL:EDT27695.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ATPase, P-type , HAD superfamily, subfamily IC n=2 Tax=Clostridium perfringens RepID=B1RE83_CLOPF
cation-transporting ATPase
L2_023_015G1_scaffold_148_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2158..3807
DNA (1650bp) protein (550aa)
manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1)
Putative manganese-dependent inorganic pyrophosphatase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RE82_CLOPF
Putative manganese-dependent inorganic pyrophosphatase {ECO:0000313|EMBL:EDT27815.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_023_015G1_scaffold_148_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3851..4492)
DNA (642bp) protein (214aa)
HAD-superfamily subfamily IB hydrolase, TIGR01490 n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZ48_CLOPF
HAD-superfamily subfamily IB hydrolase, TIGR01490 {ECO:0000313|EMBL:EDT73165.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
HAD family hydrolase
L2_023_015G1_scaffold_148_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4576..4950)
DNA (375bp) protein (125aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CY83_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15285.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_148_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5155..6570)
DNA (1416bp) protein (472aa)
glutamate decarboxylase (EC:4.1.1.15)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Glutamate decarboxylase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SRB9_CLOPS
L2_023_015G1_scaffold_148_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7326..8744)
DNA (1419bp) protein (473aa)
Glutamate:gamma aminobutyrate antiporter family protein n=9 Tax=Clostridium perfringens RepID=H7CY86_CLOPF
glutamate:gamma aminobutyrate antiporter family protein
Glutamate:gamma aminobutyrate antiporter family protein {ECO:0000313|EMBL:EDT73299.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_023_015G1_scaffold_148_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9411..12926)
DNA (3516bp) protein (1172aa)
nifJ; pyruvate-flavodoxin oxidoreductase (EC:1.2.7.1)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Pyruvate-flavodoxin oxidoreductase n=8 Tax=Clostridium perfringens RepID=Q0TNP9_CLOP1
L2_023_015G1_scaffold_148_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13031..13456)
DNA (426bp) protein (142aa)
Flavodoxin n=11 Tax=Clostridium perfringens RepID=H7CY88_CLOPF
flavodoxin
Flavodoxin {ECO:0000313|EMBL:EDT15279.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_148_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13663..14736)
DNA (1074bp) protein (358aa)
murG; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=9 Tax=Clostridium perfringens RepID=MURG_CLOP1
L2_023_015G1_scaffold_148_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14922..15101
DNA (180bp) protein (60aa)
Small, acid-soluble spore protein C1 n=11 Tax=Clostridium perfringens RepID=SAS1_CLOPE
sspC1; small, acid-soluble spore protein
Small, acid-soluble spore protein {ECO:0000313|EMBL:EDT15303.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_148_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15222..17000)
DNA (1779bp) protein (593aa)
recJ; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNP5_CLOP1
Probable single-strand DNA-specific exonuclease {ECO:0000313|EMBL:BAB81771.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_023_015G1_scaffold_148_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17012..18223)
DNA (1212bp) protein (404aa)
Peptidase, M16 family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLK6_CLOPF
Peptidase, M16 family protein {ECO:0000313|EMBL:EIA16270.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
M16 family peptidase
L2_023_015G1_scaffold_148_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18435..19010)
DNA (576bp) protein (192aa)
DJ-1 family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSR0_CLOPF
DJ-1 family protein {ECO:0000313|EMBL:EDT15305.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
DJ-1 family protein
L2_023_015G1_scaffold_148_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19022..21778)
DNA (2757bp) protein (919aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
DNA topoisomerase, GyrA/ParC subunit family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLK8_CLOPF
parC; DNA topoisomerase IV subunit A
Displaying 14 items

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