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L2_023_015G1_scaffold_196

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_015G1_scaffold_196_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..860
DNA (858bp) protein (286aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
fabF; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V5A9_CLOPF
L2_023_015G1_scaffold_196_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

872..1363
DNA (492bp) protein (164aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=6 Tax=Clostridium perfringens RepID=H7CVD2_CLOPF
accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EIA17250.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_023_015G1_scaffold_196_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1366..1785
DNA (420bp) protein (140aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000255|HAMAP-Rule:MF_00406}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00406};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000255|HAMAP-Rule:MF_00406}; Short=(3R)-hydroxymyristoyl-ACP dehydrase {ECO:0000255|HAMAP-Rule:MF_00406};; Beta-hydroxyacyl-ACP dehydratase {ECO:0000255|HAMAP-Rule:MF_00406}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=10 Tax=Clostridium perfringens RepID=FABZ_CLOP1
L2_023_015G1_scaffold_196_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1797..3149
DNA (1353bp) protein (451aa)
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:EDT71013.1}; EC=6.4.1.2 {ECO:0000313|EMBL:EDT71013.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
accC; biotin carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase n=3 Tax=Clostridium perfringens RepID=B1RRF7_CLOPF
L2_023_015G1_scaffold_196_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3142..4020
DNA (879bp) protein (293aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=6 Tax=Clostridium perfringens RepID=ACCD_CLOP1
L2_023_015G1_scaffold_196_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4013..4828
DNA (816bp) protein (272aa)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=3 Tax=Clostridium perfringens RepID=ACCA_CLOP1
L2_023_015G1_scaffold_196_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4925..5314)
DNA (390bp) protein (130aa)
PadR family transcriptional regulator n=7 Tax=Clostridium perfringens RepID=H7CVD7_CLOPF
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDT25508.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_023_015G1_scaffold_196_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5734..6552)
DNA (819bp) protein (273aa)
AP endonuclease n=1 Tax=Clostridium perfringens F262 RepID=H7CVD9_CLOPF
AP endonuclease {ECO:0000313|EMBL:EIA17257.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
AP endonuclease
L2_023_015G1_scaffold_196_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6769..7479
DNA (711bp) protein (237aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Pseudouridine synthase n=2 Tax=Clostridium perfringens RepID=B1RJS2_CLOPF
rluB; ribosomal large subunit pseudouridine synthase B
L2_023_015G1_scaffold_196_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7485..8036
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RC41_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT22201.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_023_015G1_scaffold_196_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8068..8943
DNA (876bp) protein (292aa)
RpiR family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CVE2_CLOPF
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDS81329.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_023_015G1_scaffold_196_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9163..10383
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWU1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13853.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_023_015G1_scaffold_196_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10505..11158
DNA (654bp) protein (218aa)
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Cytidylate kinase n=9 Tax=Clostridium perfringens RepID=KCY_CLOP1
L2_023_015G1_scaffold_196_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11160..12008
DNA (849bp) protein (283aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=5 Tax=Clostridium perfringens RepID=ISPH_CLOP1
L2_023_015G1_scaffold_196_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12117..12911
DNA (795bp) protein (265aa)
Acetyltransferase n=3 Tax=Clostridium perfringens RepID=H7CVE6_CLOPF
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT13831.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_023_015G1_scaffold_196_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13011..13160)
DNA (150bp) protein (50aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CVE7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17265.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_023_015G1_scaffold_196_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13297..13809
DNA (513bp) protein (171aa)
Acetyltransferase n=2 Tax=Clostridium perfringens RepID=H7CUS2_CLOPF
Acetyltransferase {ECO:0000313|EMBL:EIA17506.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
acetyltransferase
L2_023_015G1_scaffold_196_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13922..14662)
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BVC5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26731.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_023_015G1_scaffold_196_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14777..15601)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHG9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS80780.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_023_015G1_scaffold_196_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15712..16089)
DNA (378bp) protein (126aa)
Putative membrane protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVC3_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT14392.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_023_015G1_scaffold_196_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16103..16207)
DNA (105bp) protein (35aa)
Putative membrane protein n=2 Tax=Clostridium perfringens RepID=Q0TRV7_CLOP1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT14390.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Displaying 21 items

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