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L2_023_015G1_scaffold_275

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_015G1_scaffold_275_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..632
DNA (630bp) protein (210aa)
Cation-transporting ATPase, P-type {ECO:0000313|EMBL:ABG86847.1}; EC=3.6.3.- {ECO:0000313|EMBL:ABG86847.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Cation-transporting ATPase, P-type n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SRC2_CLOPS
cation-transporting atpase pacl
L2_023_015G1_scaffold_275_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(829..1236)
DNA (408bp) protein (136aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CY79_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15281.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_275_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1494..2168
DNA (675bp) protein (225aa)
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000255|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000255|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000255|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000255|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000255|HAMAP-Rule:MF_00114}; Short=Deoxyriboaldolase {ECO:0000255|HAMAP-Rule:MF_00114};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Deoxyribose-phosphate aldolase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=DEOC_CLOPS
L2_023_015G1_scaffold_275_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2369..4654
DNA (2286bp) protein (762aa)
ATP-dependent protease n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZ53_CLOPF
ATP-dependent protease {ECO:0000313|EMBL:EDT73210.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ATP-dependent protease
L2_023_015G1_scaffold_275_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4788..5123
DNA (336bp) protein (112aa)
Anti-sigma F factor antagonist n=11 Tax=Clostridium perfringens RepID=H7CY76_CLOPF
spoIIAA; anti-sigma F factor antagonist
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_023_015G1_scaffold_275_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5137..5559
DNA (423bp) protein (141aa)
spoIIAB; anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor {ECO:0000256|HAMAP-Rule:MF_00637}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00637};; Stage II sporulation protein AB {ECO:0000256|HAMAP-Rule:MF_00637}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Anti-sigma F factor n=10 Tax=Clostridium perfringens RepID=SP2AB_CLOP1
L2_023_015G1_scaffold_275_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5577..6332
DNA (756bp) protein (252aa)
RNA polymerase sigma factor n=10 Tax=Clostridium perfringens RepID=H7CY74_CLOPF
sigF; sporulation sigma factor SigF
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_023_015G1_scaffold_275_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6470..6937
DNA (468bp) protein (156aa)
Stage V sporulation protein AC n=6 Tax=Clostridium perfringens RepID=H7CY73_CLOPF
spoVAC; stage V sporulation protein AC
Stage V sporulation protein AC {ECO:0000313|EMBL:EDT25242.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_023_015G1_scaffold_275_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6943..7962
DNA (1020bp) protein (340aa)
Stage V sporulation protein AD n=6 Tax=Clostridium perfringens RepID=Q8XIR8_CLOPE
spoVAD; stage V sporulation protein AD
Stage V sporulation protein AD {ECO:0000313|EMBL:EDT15248.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_023_015G1_scaffold_275_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8031..8396
DNA (366bp) protein (122aa)
Stage V sporulation protein AE n=3 Tax=Clostridium perfringens RepID=Q0SRD1_CLOPS
spoVAE; stage V sporulation protein AE
Stage V sporulation protein AE {ECO:0000313|EMBL:BAB81751.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_023_015G1_scaffold_275_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8448..9530
DNA (1083bp) protein (361aa)
Competence family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIH2_CLOPF
Competence family protein {ECO:0000313|EMBL:EDS80366.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
comC competence related protein
Displaying 11 items

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