ggKbase home page

L2_023_015G1_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_015G1_scaffold_60_1
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1..345)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Veillonella RepID=S3ATU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD79694.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
nickel-dependent hydrogenase large subunit
L2_023_015G1_scaffold_60_2
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(345..1484)
DNA (1140bp) protein (380aa)
Uptake hydrogenase small subunit {ECO:0000313|EMBL:EJO50467.1}; EC=1.12.99.6 {ECO:0000313|EMBL:EJO50467.1};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Uptake hydrogenase small subunit n=3 Tax=Veillonella RepID=E1L5A6_9FIRM
hydrogenase (NiFe) small subunit HydA
L2_023_015G1_scaffold_60_3
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1696..2034)
DNA (339bp) protein (113aa)
Thioredoxin n=4 Tax=Veillonella RepID=E1L5A7_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
thioredoxin
L2_023_015G1_scaffold_60_4
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2495..3601)
DNA (1107bp) protein (369aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Veillonella sp. HPA0037 RepID=S3ABM1_9FIRM
hypothetical protein
L2_023_015G1_scaffold_60_5
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3623..4360)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZSD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD79698.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
hypothetical protein
L2_023_015G1_scaffold_60_6
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5063..5626)
DNA (564bp) protein (188aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
GTP cyclohydrolase 1 n=1 Tax=Veillonella sp. HPA0037 RepID=S3ATU9_9FIRM
GTP cyclohydrolase I
L2_023_015G1_scaffold_60_7
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5628..6290)
DNA (663bp) protein (221aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V-Col7a.;"
7-carboxy-7-deazaguanine synthase n=2 Tax=Veillonella atypica RepID=E1L5B1_9FIRM
radical SAM family protein
L2_023_015G1_scaffold_60_8
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6265..6603)
DNA (339bp) protein (113aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Veillonella atypica KON RepID=L1PWT5_9FIRM
6-pyruvoyl-tetrahydropterin synthase
L2_023_015G1_scaffold_60_9
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6711..7877)
DNA (1167bp) protein (389aa)
RNA polymerase sigma factor SigA n=2 Tax=Veillonella RepID=J5AR64_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L2_023_015G1_scaffold_60_10
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7899..9656)
DNA (1758bp) protein (586aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
DNA primase n=1 Tax=Veillonella atypica KON RepID=L1PWL7_9FIRM
DNA primase
L2_023_015G1_scaffold_60_11
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9826..11385)
DNA (1560bp) protein (520aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
Ribonuclease Y n=2 Tax=Veillonella atypica RepID=E1L5B5_9FIRM
RNA binding metal dependent phosphohydrolase
L2_023_015G1_scaffold_60_12
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11500..11952)
DNA (453bp) protein (151aa)
Regulatory protein RecX n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L5B6_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-049-V-Sch6.;"
regulatory protein RecX
L2_023_015G1_scaffold_60_13
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(12008..13051)
DNA (1044bp) protein (348aa)
Protein RecA n=5 Tax=Veillonella RepID=E1L5B7_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
recA protein
L2_023_015G1_scaffold_60_14
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13051..14301)
DNA (1251bp) protein (417aa)
Putative competence-damage inducible protein n=1 Tax=Veillonella sp. HPA0037 RepID=S3ABM9_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
competence/damage-inducible protein CinA
L2_023_015G1_scaffold_60_15
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14365..15711)
DNA (1347bp) protein (449aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Veillonella sp. ACP1 RepID=J4QF92_9FIRM
MiaB-like tRNA modifying enzyme YliG
L2_023_015G1_scaffold_60_16
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15779..16816)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S3ATV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD79709.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
extracellular solute-binding protein
L2_023_015G1_scaffold_60_17
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16813..18741)
DNA (1929bp) protein (643aa)
UPF0313 protein HMPREF1151_0233 n=1 Tax=Veillonella sp. ACP1 RepID=J4QF86_9FIRM
UPF0313 protein HMPREF1151_0233 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
radical SAM protein
L2_023_015G1_scaffold_60_18
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18776..19228)
DNA (453bp) protein (151aa)
Uncharacterized protein n=4 Tax=Veillonella RepID=E1L5C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFL57953.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V-Col7a.;"
XRE family transcriptional regulator
L2_023_015G1_scaffold_60_19
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19242..21935)
DNA (2694bp) protein (898aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S3ABN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD79712.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
cell division protein FtsK
L2_023_015G1_scaffold_60_20
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22013..23317)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZSF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD79713.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
ATPase AAA
L2_023_015G1_scaffold_60_21
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(23619..25421)
DNA (1803bp) protein (601aa)
Aspartate--tRNA ligase n=1 Tax=Veillonella sp. HPA0037 RepID=S3ATW1_9FIRM
Aspartate-tRNA ligase {ECO:0000313|EMBL:EPD79714.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
aspartyl-tRNA synthetase
L2_023_015G1_scaffold_60_22
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(25429..26700)
DNA (1272bp) protein (424aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Histidine--tRNA ligase n=4 Tax=Veillonella RepID=E1L5C6_9FIRM
histidyl-tRNA synthetase
L2_023_015G1_scaffold_60_23
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26700..28127)
DNA (1428bp) protein (476aa)
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Veillonella atypica KON RepID=L1PWS4_9FIRM
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:EKY19802.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
radical SAM protein
L2_023_015G1_scaffold_60_24
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28120..28608)
DNA (489bp) protein (163aa)
Transcriptional regulator, Fur family n=3 Tax=Veillonella RepID=E1LC02_9FIRM
Ferric uptake regulator family protein {ECO:0000313|EMBL:EUB27373.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
Fur family ferric uptake regulator
L2_023_015G1_scaffold_60_25
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28639..29274)
DNA (636bp) protein (212aa)
Metallo-beta-lactamase domain protein n=1 Tax=Veillonella atypica KON RepID=L1PWK6_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EUB27411.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
beta-lactamase
L2_023_015G1_scaffold_60_26
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29274..31514)
DNA (2241bp) protein (747aa)
RelA/SpoT family protein n=1 Tax=Veillonella sp. HPA0037 RepID=S3ATW6_9FIRM
RelA/SpoT family protein {ECO:0000313|EMBL:EPD79719.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
(p)ppGpp synthetase I SpoT/RelA
L2_023_015G1_scaffold_60_27
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31511..33505)
DNA (1995bp) protein (665aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EFL56628.1}; EC=3.1.-.- {ECO:0000313|EMBL:EFL56628.1};; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-049-V-Sch6.;"
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L5D1_9FIRM
single-stranded-DNA-specific exonuclease RecJ
L2_023_015G1_scaffold_60_28
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(33794..35212)
DNA (1419bp) protein (473aa)
[FeFe] hydrogenase H-cluster radical SAM maturase HydG n=2 Tax=Veillonella RepID=S2ZTL3_9FIRM
[FeFe] hydrogenase H-cluster radical SAM maturase HydG {ECO:0000313|EMBL:EUB27389.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
biotin and thiamin synthesis associated protein
L2_023_015G1_scaffold_60_29
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(35502..36266)
DNA (765bp) protein (255aa)
TIGR00245 family protein n=1 Tax=Veillonella sp. ACP1 RepID=J4QFA7_9FIRM
TIGR00245 family protein {ECO:0000313|EMBL:EJO50469.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
membrane protein
L2_023_015G1_scaffold_60_30
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(36263..36919)
DNA (657bp) protein (219aa)
Putative ABC transporter, ATP-binding protein YbbL n=1 Tax=Veillonella sp. ACP1 RepID=J5AR72_9FIRM
Putative ABC transporter, ATP-binding protein YbbL {ECO:0000313|EMBL:EJO50458.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
ABC transporter ATP-binding protein
Displaying items 1-30 of 53 in total

View Taxonomy