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L2_023_067G1_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_067G1_scaffold_29_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(122..979)
DNA (858bp) protein (286aa)
Glutamate racemase {ECO:0000255|HAMAP-Rule:MF_00258}; EC=5.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00258};; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Glutamate racemase n=109 Tax=Escherichia coli RepID=MURI_ECO81
murI; glutamate racemase
L2_023_067G1_scaffold_29_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(924..2768)
DNA (1845bp) protein (615aa)
Vitamin B12 transporter BtuB n=137 Tax=Escherichia coli RepID=E2QJ01_ECOLX
Vitamin B12 transporter BtuB {ECO:0000256|HAMAP-Rule:MF_01531}; Cobalamin receptor {ECO:0000256|HAMAP-Rule:MF_01531}; Outer membrane cobalamin translocator {ECO:0000256|HAMAP-Rule:MF_01531}; Flags: Precursor;; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
btuB; vitamin B12/cobalamin outer membrane
L2_023_067G1_scaffold_29_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3137..4237
DNA (1101bp) protein (367aa)
trmA; tRNA (uracil-5-)-methyltransferase (EC:2.1.1.35)
tRNA/tmRNA (uracil-C(5))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01011}; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_01011};; EC=2.1.1.35 {ECO:0000255|HAMAP-Rule:MF_01011};; tRNA (uracil(54)-C(5))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01011}; tRNA(m5U54)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01011}; Short=RUMT {ECO:0000255|HAMAP-Rule:MF_01011};; tmRNA (uracil(341)-C(5))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01011}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
tRNA/tmRNA (uracil-C(5))-methyltransferase n=276 Tax=Escherichia RepID=TRMA_ECO45
L2_023_067G1_scaffold_29_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4277..4636)
DNA (360bp) protein (120aa)
Inner membrane protein YijD n=1323 Tax=Enterobacteriaceae RepID=YIJD_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR15621.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L2_023_067G1_scaffold_29_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4636..5340)
DNA (705bp) protein (235aa)
HTH-type transcriptional repressor FabR n=2 Tax=Escherichia coli RepID=T5NZ86_ECOLX
yijC; DNA-binding transcriptional repressor FabR
HTH-type transcriptional repressor FabR {ECO:0000256|HAMAP-Rule:MF_01190}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_023_067G1_scaffold_29_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5390..6706)
DNA (1317bp) protein (439aa)
Citrate permease n=305 Tax=Escherichia RepID=E2QIZ7_ECOLX
putative proton/carboxylic acid permease
Sugar (And other) transporter family protein {ECO:0000313|EMBL:EHU22495.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
L2_023_067G1_scaffold_29_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6749..7915)
DNA (1167bp) protein (389aa)
putative hippuricase (EC:3.5.1.32)
Hippuricase n=233 Tax=Escherichia RepID=E2QIZ6_ECOLX
Amidohydrolase {ECO:0000313|EMBL:ESD42404.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_023_067G1_scaffold_29_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8245..9645
DNA (1401bp) protein (467aa)
Soluble pyridine nucleotide transhydrogenase {ECO:0000256|HAMAP-Rule:MF_00247}; Short=STH {ECO:0000256|HAMAP-Rule:MF_00247};; EC=1.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00247};; NAD(P)(+) transhydrogenase [B-specific] {ECO:0000256|HAMAP-Rule:MF_00247}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
Soluble pyridine nucleotide transhydrogenase n=182 Tax=Escherichia coli RepID=STHA_ECOL6
udhA; soluble pyridine nucleotide transhydrogenase
L2_023_067G1_scaffold_29_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9628..10545)
DNA (918bp) protein (306aa)
Hydrogen peroxide-inducible genes activator n=1285 Tax=Enterobacteriaceae RepID=OXYR_ECO57
oxyR; hydrogen peroxide-inducible genes activator
LysR substrate binding domain protein {ECO:0000313|EMBL:KDY17994.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
L2_023_067G1_scaffold_29_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10797..12080)
DNA (1284bp) protein (428aa)
Phthalate permease family protein n=305 Tax=Escherichia RepID=D5D624_ECOKI
transporter
Putative transporter {ECO:0000313|EMBL:CAR10637.1}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L2_023_067G1_scaffold_29_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12147..13361)
DNA (1215bp) protein (405aa)
Starvation-sensing protein rspA n=214 Tax=Escherichia coli RepID=E2QIZ2_ECOLX
starvation sensing protein
Starvation sensing protein RspA mannonate/altronate dehydratase {ECO:0000313|EMBL:EHU34820.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L2_023_067G1_scaffold_29_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13859..15232)
DNA (1374bp) protein (458aa)
Argininosuccinate lyase {ECO:0000255|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000255|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000255|HAMAP-Rule:MF_00006}; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Argininosuccinate lyase n=320 Tax=Escherichia RepID=ARLY_ECO45
argH; argininosuccinate lyase
L2_023_067G1_scaffold_29_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15293..16069)
DNA (777bp) protein (259aa)
Acetylglutamate kinase; EC=2.7.2.8;; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; Short=AGK;; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Acetylglutamate kinase n=200 Tax=Escherichia coli RepID=ARGB_ECOL5
argB; acetylglutamate kinase
L2_023_067G1_scaffold_29_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16077..17081)
DNA (1005bp) protein (335aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
N-acetyl-gamma-glutamyl-phosphate reductase n=268 Tax=Escherichia RepID=ARGC_ECOL6
L2_023_067G1_scaffold_29_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17243..18394
DNA (1152bp) protein (384aa)
acetylornithine deacetylase (EC:3.5.1.16)
Acetylornithine deacetylase; Short=AO;; Short=Acetylornithinase;; EC=3.5.1.16;; N-acetylornithinase; Short=NAO;; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Acetylornithine deacetylase n=295 Tax=Enterobacteriaceae RepID=ARGE_ECO45
L2_023_067G1_scaffold_29_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18696..21347
DNA (2652bp) protein (884aa)
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
Phosphoenolpyruvate carboxylase n=665 Tax=Enterobacteriaceae RepID=CAPP_ECO24
L2_023_067G1_scaffold_29_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21530..23263
DNA (1734bp) protein (578aa)
Phosphoethanolamine transferase EptC n=361 Tax=Escherichia RepID=EPTC_ECOLX
Phosphoethanolamine transferase CptA {ECO:0000313|EMBL:ELE51263.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
yijP; hypothetical protein
L2_023_067G1_scaffold_29_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23489..24340
DNA (852bp) protein (284aa)
Predicted DNA-binding transcriptional regulator n=270 Tax=Escherichia RepID=A1AID2_ECOK1
putative transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:EYZ97545.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
L2_023_067G1_scaffold_29_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24327..24668)
DNA (342bp) protein (114aa)
Fructose-like phosphotransferase enzyme IIB component 3 n=870 Tax=Enterobacteriaceae RepID=E2QIY4_ECOLX
fructose-like phosphotransferase enzyme IIB, component 3
Fructose-like phosphotransferase enzyme IIB component 3 {ECO:0000313|EMBL:ESP06434.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L2_023_067G1_scaffold_29_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24670..25548)
DNA (879bp) protein (293aa)
Pyruvate formate-lyase 2 activating enzyme n=197 Tax=Escherichia RepID=A1AID0_ECOK1
pflC; pyruvate formate lyase II activase
Pyruvate formate lyase II activase {ECO:0000313|EMBL:CAR05586.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L2_023_067G1_scaffold_29_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25514..27811)
DNA (2298bp) protein (766aa)
Formate acetyltransferase 2 n=147 Tax=Escherichia coli RepID=E2QIY2_ECOLX
pflD; putative formate acetyltransferase 2
Glycyl radical enzyme, PFL2/glycerol dehydratase family protein {ECO:0000313|EMBL:EZJ47977.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_023_067G1_scaffold_29_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27862..28182)
DNA (321bp) protein (107aa)
PTS system fructose-specific transporter subunit IIB (EC:2.7.1.69)
Fructose-like phosphotransferase enzyme IIB component 2 {ECO:0000313|EMBL:KDW80661.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KDW80661.1};; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
Fructose-like phosphotransferase enzyme IIB component 2 n=1376 Tax=Enterobacteriaceae RepID=PTFB2_ECO57
L2_023_067G1_scaffold_29_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28197..29276)
DNA (1080bp) protein (360aa)
Fructose-like permease IIC component 2 n=338 Tax=Escherichia RepID=E2QIY0_ECOLX
putative fructose-like permease EIIC subunit 2
Fructose-like specific PTS system EIIC component 2 {ECO:0000313|EMBL:CKH37708.1}; PTS system fructose-like transporter subunit EIIC {ECO:0000313|EMBL:AJO86050.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_023_067G1_scaffold_29_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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29585..32086
DNA (2502bp) protein (834aa)
Multiphosphoryl transfer protein 2 [includes phosphoenolpyruvate-protein phosphotransferase%3B phosphocarrier protein Hpr%3B fructose-like specific PTS system EIIA component] {ECO:0000313|EMBL:CKH37665.1}; EC=2.7.3.9 {ECO:0000313|EMBL:CKH37665.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Multiphosphoryl transfer protein 2 n=5 Tax=Escherichia coli RepID=L4SM31_ECOLX
ptsA; phosphoenolpyruvate-protein phosphotransferase
L2_023_067G1_scaffold_29_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32098..32760
DNA (663bp) protein (221aa)
Fructose-6-phosphate aldolase 2; EC=4.1.2.-;; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Fructose-6-phosphate aldolase 2 n=122 Tax=Escherichia coli RepID=FSAB_ECOL6
talC; fructose-6-phosphate aldolase
L2_023_067G1_scaffold_29_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32771..33874
DNA (1104bp) protein (368aa)
Glycerol dehydrogenase n=11 Tax=Escherichia coli RepID=G7R7V7_ECOC2
iron-containing alcohol dehydrogenase
Glycerol dehydrogenase {ECO:0000313|EMBL:ESA96110.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
L2_023_067G1_scaffold_29_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34150..34767
DNA (618bp) protein (206aa)
Uncharacterized protein yijF n=115 Tax=Escherichia coli RepID=E2QIX6_ECOLX
yijF; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQX23741.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_023_067G1_scaffold_29_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34794..35699)
DNA (906bp) protein (302aa)
Putative membrane protein (Fragment) n=1 Tax=Escherichia coli MS 21-1 RepID=D8A9M1_ECOLX
yijE; putative inner membrane transporter yiJE
Uncharacterized protein {ECO:0000313|EMBL:EHU17596.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L2_023_067G1_scaffold_29_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35793..37973)
DNA (2181bp) protein (727aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
katG; catalase/peroxidase HPI (EC:1.11.1.6)
Catalase-peroxidase n=513 Tax=Enterobacteriaceae RepID=KATG_ECOK1
L2_023_067G1_scaffold_29_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38302..39192)
DNA (891bp) protein (297aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Methylenetetrahydrofolate reductase n=330 Tax=Escherichia RepID=E2QIX3_ECOLX
metF; 5,10-methylenetetrahydrofolate reductase
Displaying items 1-30 of 120 in total

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