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L2_023_067G1_scaffold_95

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_067G1_scaffold_95_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..502
DNA (501bp) protein (167aa)
Phosphomannomutase n=2 Tax=Escherichia coli RepID=V8JNM2_ECOLX
manB; phosphomannomutase
Phosphomannomutase {ECO:0000313|EMBL:AAG41759.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_023_067G1_scaffold_95_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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665..2071
DNA (1407bp) protein (469aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485};; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
6-phosphogluconate dehydrogenase, decarboxylating n=178 Tax=Enterobacteriaceae RepID=Q47580_ECOLX
L2_023_067G1_scaffold_95_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2321..3487
DNA (1167bp) protein (389aa)
UDP-glucose 6-dehydrogenase; Short=UDP-Glc dehydrogenase;; Short=UDP-GlcDH;; Short=UDPGDH;; EC=1.1.1.22;; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
UDP-glucose 6-dehydrogenase n=94 Tax=Escherichia coli RepID=UDG_ECOL6
ugd; UDP-glucose 6-dehydrogenase
L2_023_067G1_scaffold_95_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3630..4607
DNA (978bp) protein (326aa)
Chain length determinant protein n=111 Tax=Escherichia coli RepID=D5D5R5_ECOKI
chain length determinant protein
Chain length determinant protein {ECO:0000313|EMBL:KEJ57457.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L2_023_067G1_scaffold_95_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4793..5404)
DNA (612bp) protein (204aa)
hisE; Phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=112 Tax=Escherichia coli RepID=HIS2_ECOL6
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_023_067G1_scaffold_95_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5398..6174)
DNA (777bp) protein (259aa)
hisF; Imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000255|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000255|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000255|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000255|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000255|HAMAP-Rule:MF_01013}; Short=IGPS subunit HisF {ECO:0000255|HAMAP-Rule:MF_01013};; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Imidazole glycerol phosphate synthase subunit HisF n=115 Tax=Escherichia coli RepID=HIS6_ECOL5
L2_023_067G1_scaffold_95_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6156..6893)
DNA (738bp) protein (246aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000255|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000255|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000255|HAMAP-Rule:MF_01014}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=113 Tax=Escherichia coli RepID=HIS4_ECOL5
hisA; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase (HisA)
L2_023_067G1_scaffold_95_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6893..7483)
DNA (591bp) protein (197aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
Imidazole glycerol phosphate synthase subunit HisH n=904 Tax=Bacteria RepID=HIS5_ECOL6
L2_023_067G1_scaffold_95_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7483..8550)
DNA (1068bp) protein (356aa)
hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase (EC:3.1.3.15 4.2.1.19)
Histidine biosynthesis bifunctional protein HisB n=118 Tax=Escherichia coli RepID=HIS7_ECOL6
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|HAMAP-Rule:MF_01022, ECO:0000256|SAAS:SAAS00021560}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L2_023_067G1_scaffold_95_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8550..9620)
DNA (1071bp) protein (357aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Histidinol-phosphate aminotransferase n=118 Tax=Escherichia coli RepID=HIS8_ECOL5
L2_023_067G1_scaffold_95_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9617..10921)
DNA (1305bp) protein (435aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Histidinol dehydrogenase n=120 Tax=Escherichia coli RepID=HISX_ECOL6
L2_023_067G1_scaffold_95_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10927..11826)
DNA (900bp) protein (300aa)
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
ATP phosphoribosyltransferase n=851 Tax=Enterobacteriaceae RepID=HIS1_ECO24
L2_023_067G1_scaffold_95_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12305..12556
DNA (252bp) protein (84aa)
Antitoxin YefM n=19 Tax=Escherichia coli RepID=G7RBZ5_ECOC2
yefM; antitoxin of the YoeB-YefM toxin-antitoxin system
YefM protein (Antitoxin to YoeB) {ECO:0000313|EMBL:CDK44871.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
L2_023_067G1_scaffold_95_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12553..12807
DNA (255bp) protein (85aa)
Toxin YoeB n=162 Tax=Escherichia coli RepID=YOEB_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE07758.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_023_067G1_scaffold_95_15
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12890..13714
DNA (825bp) protein (275aa)
Protein yeeZ n=148 Tax=Escherichia RepID=E2QNP1_ECOLX
hypothetical protein
Protein yeeZ {ECO:0000313|EMBL:CDC80770.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_023_067G1_scaffold_95_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13739..14689
DNA (951bp) protein (317aa)
Transcriptional regulator n=2 Tax=Escherichia coli RepID=L3JUQ2_ECOLX
yeeY; putative transcriptional regulator YeeY
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:BAK69112.1}; TaxID=930407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H39.;"
L2_023_067G1_scaffold_95_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14956..16314
DNA (1359bp) protein (453aa)
Inner membrane transport protein yeeF n=288 Tax=Escherichia RepID=E2QNN9_ECOLX
yeeF; transport protein YeeF
Putrescine importer {ECO:0000313|EMBL:EHU39600.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L2_023_067G1_scaffold_95_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16388..17815)
DNA (1428bp) protein (476aa)
sbcB; Exodeoxyribonuclease I (EC:3.1.11.1)
Exodeoxyribonuclease I {ECO:0000256|PIRNR:PIRNR000977}; EC=3.1.11.1 {ECO:0000256|PIRNR:PIRNR000977};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Exonuclease I n=156 Tax=Escherichia RepID=G7RBZ0_ECOC2
L2_023_067G1_scaffold_95_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18024..19190
DNA (1167bp) protein (389aa)
dacD; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
DD-carboxypeptidase n=171 Tax=Escherichia coli RepID=E1PFP6_ECOAB
D-alanyl-D-alanine carboxypeptidase dacD {ECO:0000313|EMBL:EQX81713.1}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3190-1.;"
L2_023_067G1_scaffold_95_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19309..19782
DNA (474bp) protein (158aa)
DNA gyrase inhibitor (Fragment) n=1 Tax=Escherichia coli MS 21-1 RepID=D8A9G5_ECOLX
sbmC; DNA gyrase inhibitor
Transcriptional regulator, effector binding domain protein {ECO:0000313|EMBL:EFK20208.1}; Flags: Fragment;; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L2_023_067G1_scaffold_95_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19980..21038
DNA (1059bp) protein (353aa)
Inner membrane protein yeeA n=298 Tax=Escherichia RepID=Q1RPC2_ECOLX
hypothetical protein
Fusaric acid resistance domain protein {ECO:0000313|EMBL:EIG82148.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L2_023_067G1_scaffold_95_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21210..21539
DNA (330bp) protein (110aa)
Putative alpha helix protein n=1 Tax=Shigella boydii serotype 4 (strain Sb227) RepID=Q323K5_SHIBS
hypothetical protein
UPF0265 protein YeeX {ECO:0000256|HAMAP-Rule:MF_00683}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L2_023_067G1_scaffold_95_23
unknown

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comp(22009..22113)
DNA (105bp) protein (35aa)

This feature has no annotations

L2_023_067G1_scaffold_95_24
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22398..22592)
DNA (195bp) protein (65aa)
Conserved domain protein n=253 Tax=Escherichia RepID=D5D5P5_ECOKI
hypothetical protein
Uncharacterized protein YeeW {ECO:0000313|EMBL:CDK75801.1}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS22.;"
L2_023_067G1_scaffold_95_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22589..22705)
DNA (117bp) protein (39aa)
Toxin YeeV n=1 Tax=Escherichia coli KTE85 RepID=L5HAC2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK20206.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
Displaying 25 items

View Taxonomy