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L2_023_067G1_scaffold_172

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_067G1_scaffold_172_1

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1..285
DNA (285bp) protein (95aa)
Uncharacterized protein (Fragment) n=1 Tax=Escherichia coli O25b:H4-ST131 str. EC958 RepID=N1N6Q7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ45366.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_023_067G1_scaffold_172_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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261..1064
DNA (804bp) protein (268aa)
dkgB; 2,5-diketo-D-gluconate reductase B (EC:1.1.1.274)
2,5-diketo-D-gluconic acid reductase B {ECO:0000313|EMBL:EZJ46600.1}; EC=1.1.1.274 {ECO:0000313|EMBL:EZJ46600.1};; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
2,5-diketo-D-gluconic acid reductase B n=323 Tax=Escherichia RepID=E2QFC9_ECOLX
L2_023_067G1_scaffold_172_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1061..1975)
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=171 Tax=Escherichia RepID=Q0TLC9_ECOL5
yafC; putative transcriptional regulator LYSR-type
Transcriptional regulator {ECO:0000313|EMBL:EQP60003.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_023_067G1_scaffold_172_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2192..3016
DNA (825bp) protein (275aa)
UPF0294 protein YafD n=861 Tax=Enterobacteriaceae RepID=A1A7Q0_ECOK1
hypothetical protein
UPF0294 protein YafD {ECO:0000256|HAMAP-Rule:MF_01119}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_023_067G1_scaffold_172_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3094..3864
DNA (771bp) protein (257aa)
Uncharacterized protein n=117 Tax=Escherichia coli RepID=G7R2P7_ECOC2
yafE; methyltransferase YafE
Methyltransferase domain protein {ECO:0000313|EMBL:EIH21535.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L2_023_067G1_scaffold_172_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3913..5271)
DNA (1359bp) protein (453aa)
Membrane-bound lytic murein transglycosylase D n=966 Tax=Enterobacteriaceae RepID=MLTD_ECOL6
mltD; membrane-bound lytic murein transglycosylase D
Lytic transglycosylase {ECO:0000313|EMBL:EFF13961.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
L2_023_067G1_scaffold_172_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5343..6098)
DNA (756bp) protein (252aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Hydroxyacylglutathione hydrolase n=123 Tax=Escherichia coli RepID=E1P6M0_ECOAB
gloB; hydroxyacylglutathione hydrolase
L2_023_067G1_scaffold_172_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6132..6854
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=D3GS41_ECO44
putative methyltransferase
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:ESK42824.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L2_023_067G1_scaffold_172_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6851..7318)
DNA (468bp) protein (156aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Ribonuclease H n=122 Tax=Escherichia coli RepID=G7R2Q1_ECOC2
rnhA; ribonuclease H
L2_023_067G1_scaffold_172_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7374..8114
DNA (741bp) protein (247aa)
DNA polymerase III subunit epsilon n=2 Tax=Escherichia coli RepID=I4T027_ECOLX
DNA polymerase III subunit epsilon
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EQN33415.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L2_023_067G1_scaffold_172_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8444..8683)
DNA (240bp) protein (80aa)
Uncharacterized protein n=124 Tax=Escherichia coli RepID=E1P6M4_ECOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIH21673.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L2_023_067G1_scaffold_172_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8855..9301)
DNA (447bp) protein (149aa)
Uncharacterized protein n=131 Tax=Escherichia coli RepID=E1P6M5_ECOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIH21652.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L2_023_067G1_scaffold_172_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9619..9837
DNA (219bp) protein (73aa)
Uncharacterized protein n=132 Tax=Escherichia coli RepID=G7R2Q5_ECOC2
hypothetical protein
Transposase {ECO:0000313|EMBL:EYZ94408.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
L2_023_067G1_scaffold_172_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9907..10257
DNA (351bp) protein (117aa)
Uncharacterized protein n=125 Tax=Escherichia coli RepID=G7R2Q6_ECOC2
hypothetical protein
IS66 family element, Orf2 protein {ECO:0000313|EMBL:EGI52334.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L2_023_067G1_scaffold_172_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10261..10935
DNA (675bp) protein (225aa)
L0015-like protein n=116 Tax=Escherichia coli RepID=Q8VRB4_ECOLX
hypothetical protein
L0015-like protein {ECO:0000313|EMBL:AAL67334.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_023_067G1_scaffold_172_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10886..11836
DNA (951bp) protein (317aa)
Uncharacterized protein n=91 Tax=Escherichia coli RepID=G7R2Q8_ECOC2
hypothetical protein
ECs1339 protein {ECO:0000313|EMBL:CAJ87534.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_023_067G1_scaffold_172_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11946..12884)
DNA (939bp) protein (313aa)
Uncharacterized protein n=13 Tax=Escherichia coli RepID=G7R2Q9_ECOC2
hypothetical protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:KEJ57179.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
Displaying 17 items

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