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L2_023_068G1_scaffold_54

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Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_068G1_scaffold_54_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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44..760
DNA (717bp) protein (239aa)
Aerobic respiration control protein ArcA n=1411 Tax=Enterobacteriaceae RepID=ARCA_ECO57
aerobic respiration control protein ArcA
Aerobic respiration control protein ArcA {ECO:0000313|EMBL:ELC12317.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_023_068G1_scaffold_54_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(820..2172)
DNA (1353bp) protein (451aa)
Inner membrane protein CreD n=127 Tax=Escherichia coli RepID=E1PGZ9_ECOAB
creD; inner membrane protein CreD
Inner membrane protein CreD {ECO:0000313|EMBL:EQX20773.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_023_068G1_scaffold_54_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2230..3654)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
Sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon n=188 Tax=Escherichia RepID=A1AJW8_ECOK1
creC; sensor protein CreC
L2_023_068G1_scaffold_54_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3654..4343)
DNA (690bp) protein (230aa)
Transcriptional regulatory protein creB n=329 Tax=Escherichia RepID=E2QLF9_ECOLX
creB; DNA-binding response regulator CreB
Transcriptional regulatory protein CreB {ECO:0000313|EMBL:EOV81969.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L2_023_068G1_scaffold_54_5
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4356..4829)
DNA (474bp) protein (158aa)
Protein CreA n=1407 Tax=Enterobacteriaceae RepID=CREA_ECO57
hypothetical protein
Protein CreA {ECO:0000256|PIRNR:PIRNR003174}; Catabolite regulation protein A {ECO:0000256|PIRNR:PIRNR003174}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
L2_023_068G1_scaffold_54_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5040..5909
DNA (870bp) protein (290aa)
Right origin-binding protein n=280 Tax=Escherichia coli RepID=E2QLF7_ECOLX
DNA-binding transcriptional activator
Right origin-binding protein {ECO:0000313|EMBL:EZJ46942.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L2_023_068G1_scaffold_54_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5906..6553)
DNA (648bp) protein (216aa)
Probable phosphoglycerate mutase GpmB {ECO:0000256|HAMAP-Rule:MF_01040, ECO:0000256|SAAS:SAAS00013984}; EC=5.4.2.- {ECO:0000256|HAMAP-Rule:MF_01040};; PGAM {ECO:0000256|HAMAP-Rule:MF_01040}; Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01040}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Probable phosphoglycerate mutase GpmB n=348 Tax=Escherichia RepID=GPMB_ECO45
gpmB; phosphoglycerate mutase
L2_023_068G1_scaffold_54_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6605..7132
DNA (528bp) protein (176aa)
Non-canonical purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00648};; Non-standard purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; Nucleoside-triphosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
Non-canonical purine NTP phosphatase n=197 Tax=Escherichia RepID=NCPP_ECO27
yjjX; NTPase
L2_023_068G1_scaffold_54_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7205..7501)
DNA (297bp) protein (99aa)
Trp operon repressor n=336 Tax=Escherichia RepID=TRPR_ECO27
trpR; Trp operon repressor
Trp operon repressor {ECO:0000256|HAMAP-Rule:MF_00475, ECO:0000256|SAAS:SAAS00234182}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L2_023_068G1_scaffold_54_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7621..9558)
DNA (1938bp) protein (646aa)
slt; lytic murein transglycosylase (EC:3.2.1.-)
Murein transglycosylase {ECO:0000313|EMBL:CKH61979.1}; EC=4.2.2.- {ECO:0000313|EMBL:CKH61979.1};; Slt {ECO:0000313|EMBL:AJF45155.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Soluble lytic murein transglycosylase n=245 Tax=Escherichia coli RepID=E2QLF3_ECOLX
L2_023_068G1_scaffold_54_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9765..11432
DNA (1668bp) protein (556aa)
Heme ABC exporter, ATP-binding protein CcmA {ECO:0000313|EMBL:KEJ53268.1}; EC=3.6.3.41 {ECO:0000313|EMBL:KEJ53268.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Uncharacterized ABC transporter ATP-binding protein yjjK n=311 Tax=Escherichia RepID=E2QLF2_ECOLX
yjjK; ABC transporter ATP-binding protein
L2_023_068G1_scaffold_54_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11488..11772)
DNA (285bp) protein (95aa)
Uncharacterized protein n=313 Tax=Escherichia RepID=B7LNT2_ESCF3
DNA-binding protein
Helix-turn-helix family protein {ECO:0000313|EMBL:EZJ55226.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_023_068G1_scaffold_54_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11774..12106)
DNA (333bp) protein (111aa)
Uncharacterized protein n=166 Tax=Escherichia coli RepID=G7RDB9_ECOC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELJ63780.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_023_068G1_scaffold_54_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12198..13430)
DNA (1233bp) protein (411aa)
Transcriptional regulator NadR {ECO:0000313|EMBL:EKJ10464.1}; EC=2.7.7.1 {ECO:0000313|EMBL:EKJ10464.1};; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
Transcriptional regulator nadR n=332 Tax=Escherichia RepID=E2QLF0_ECOLX
nadR; nicotinamide-nucleotide adenylyltransferase
L2_023_068G1_scaffold_54_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13451..14833)
DNA (1383bp) protein (461aa)
DNA repair protein radA n=1131 Tax=Enterobacteriaceae RepID=C3SE38_ECOLX
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L2_023_068G1_scaffold_54_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14882..15850)
DNA (969bp) protein (323aa)
serB; phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase n=290 Tax=Escherichia coli RepID=E2QLE8_ECOLX
Phosphoserine phosphatase {ECO:0000313|EMBL:ELE59099.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L2_023_068G1_scaffold_54_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15956..16600
DNA (645bp) protein (215aa)
Protein smp n=351 Tax=Escherichia RepID=E2QLE7_ECOLX
ytjB; hypothetical protein
Protein smp {ECO:0000313|EMBL:EQP97926.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L2_023_068G1_scaffold_54_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16628..17644
DNA (1017bp) protein (339aa)
Lipoate-protein ligase A {ECO:0000255|HAMAP-Rule:MF_01602}; EC=2.7.7.63 {ECO:0000255|HAMAP-Rule:MF_01602};; Lipoate--protein ligase {ECO:0000255|HAMAP-Rule:MF_01602}; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Lipoate-protein ligase A n=92 Tax=Escherichia coli RepID=LPLA_ECOL6
lplA; lipoate-protein ligase A
L2_023_068G1_scaffold_54_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17645..18976)
DNA (1332bp) protein (444aa)
Uncharacterized protein yjjJ n=193 Tax=Escherichia coli RepID=E2QLE5_ECOLX
yjjJ; hypothetical protein
HipA-like N-terminal domain protein {ECO:0000313|EMBL:EZJ55219.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_023_068G1_scaffold_54_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19143..19862)
DNA (720bp) protein (240aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
Purine nucleoside phosphorylase DeoD-type n=621 Tax=Enterobacteriaceae RepID=DEOD_ECO27
deoD; purine nucleoside phosphorylase DeoD
L2_023_068G1_scaffold_54_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19919..21142)
DNA (1224bp) protein (408aa)
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
Phosphopentomutase n=1128 Tax=Enterobacteriaceae RepID=DEOB_ECO24
L2_023_068G1_scaffold_54_22
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21194..22516)
DNA (1323bp) protein (441aa)
deoA; thymidine phosphorylase (EC:2.4.2.4)
Thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031985};; TdRPase {ECO:0000256|HAMAP-Rule:MF_01628}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
Thymidine phosphorylase n=913 Tax=Enterobacteriaceae RepID=TYPH_ECO24
L2_023_068G1_scaffold_54_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22594..23373)
DNA (780bp) protein (260aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00592, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00592};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00592, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00592}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00592}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
Deoxyribose-phosphate aldolase n=296 Tax=Escherichia coli RepID=DEOC_ECO45
deoC; Deoxyribose-phosphate aldolase
L2_023_068G1_scaffold_54_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23631..25181
DNA (1551bp) protein (517aa)
Uncharacterized protein n=93 Tax=Escherichia coli RepID=E1PGX7_ECOAB
yjjI; hypothetical protein
YjjI family glycine radical enzyme {ECO:0000313|EMBL:EOW90220.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_023_068G1_scaffold_54_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25312..26016
DNA (705bp) protein (235aa)
YjjW family glycine radical enzyme activase n=84 Tax=Escherichia coli RepID=L2Z5X6_ECOLX
yjjW; radical SAM domain-containing protein
Radical SAM superfamily protein {ECO:0000313|EMBL:EHU29841.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L2_023_068G1_scaffold_54_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26233..27012)
DNA (780bp) protein (260aa)
yjjV; putative deoxyribonuclease YjjV (EC:3.1.21.-)
Uncharacterized deoxyribonuclease yjjV n=180 Tax=Escherichia coli RepID=E2QLD8_ECOLX
TatD family hydrolase {ECO:0000313|EMBL:EOV69820.1}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.;"
L2_023_068G1_scaffold_54_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27009..28082)
DNA (1074bp) protein (358aa)
Phospholipase, patatin family n=242 Tax=Escherichia RepID=B1LEI1_ECOSM
patatin family phospholipase
Predicted esterase {ECO:0000313|EMBL:CAS12223.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
L2_023_068G1_scaffold_54_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28204..28365)
DNA (162bp) protein (54aa)
UPF0391 membrane protein YtjA n=1448 Tax=Enterobacteriaceae RepID=YTJA_ECO24
hypothetical protein
UPF0391 membrane protein YtjA {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L2_023_068G1_scaffold_54_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28492..29097)
DNA (606bp) protein (202aa)
Osmotically-inducible protein Y n=946 Tax=Enterobacteriaceae RepID=OSMY_ECOL6
osmY; hypothetical protein
Phospholipid-binding domain protein {ECO:0000313|EMBL:ESA83543.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L2_023_068G1_scaffold_54_30
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29490..31079)
DNA (1590bp) protein (530aa)
Peptide chain release factor 3 n=638 Tax=Enterobacteriaceae RepID=RF3_ECO27
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=754093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae 1617.;"
prfC; Peptide chain release factor 3
Displaying items 1-30 of 93 in total

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