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L2_023_126G1_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_16_1
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..142
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XSM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD63430.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L2_023_126G1_scaffold_16_2
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

332..685
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E9RST7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75690.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L2_023_126G1_scaffold_16_3
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

666..875
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RST8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75691.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Transcriptional regulator, HTH-typeTn916-like,CTn1-Orf15
L2_023_126G1_scaffold_16_4
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

967..1290
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YTU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65490.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L2_023_126G1_scaffold_16_5
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1472..1837
DNA (366bp) protein (122aa)
Thioredoxin n=1 Tax=Coprococcus sp. HPP0048 RepID=S2Z670_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
thioredoxin
L2_023_126G1_scaffold_16_6
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1986..2660)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=S2Y753_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65486.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
transcriptional regulator
L2_023_126G1_scaffold_16_7
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2824..4215
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RSU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75695.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
amino acid carrier protein
L2_023_126G1_scaffold_16_8
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4367..5155
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E9RSU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75696.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L2_023_126G1_scaffold_16_9
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5298..6854)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z7E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59994.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
ATPase components of ABC transporters with duplicated ATPase domains
L2_023_126G1_scaffold_16_10
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7080..7337)
DNA (258bp) protein (86aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RSU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87583.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Coat F domain.
L2_023_126G1_scaffold_16_11
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7351..7533)
DNA (183bp) protein (61aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RSU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87582.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_16_12
unknown

Not on your lists

7691..7837
DNA (147bp) protein (49aa)

This feature has no annotations

L2_023_126G1_scaffold_16_13
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8130..8672
DNA (543bp) protein (181aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RSU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75700.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
N-acetyltransferase GCN5
L2_023_126G1_scaffold_16_14
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8819..9265)
DNA (447bp) protein (149aa)
Aspartate carbamoyltransferase, regulatory subunit n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZNH5_9FIRM
Aspartate carbamoyltransferase, regulatory subunit {ECO:0000313|EMBL:EPD65479.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Aspartate carbamoyltransferase, regulatory subunit
L2_023_126G1_scaffold_16_15
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9286..10203)
DNA (918bp) protein (306aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=3 Tax=Lachnospiraceae RepID=E9RSU9_9FIRM
L2_023_126G1_scaffold_16_16
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10213..10749)
DNA (537bp) protein (179aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RSV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD60000.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Nitroreductase
L2_023_126G1_scaffold_16_17
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10840..11193)
DNA (354bp) protein (118aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RSV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD60001.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L2_023_126G1_scaffold_16_18
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11375..12505
DNA (1131bp) protein (377aa)
Prephenate dehydratase (EC:4.2.1.51)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RSV2_9FIRM
Chorismate mutase {ECO:0000313|EMBL:EPD60002.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L2_023_126G1_scaffold_16_19
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12670..14094
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RSV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75706.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L2_023_126G1_scaffold_16_20
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14188..15927)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E9RSV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87575.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Predicted RNA-binding protein homologous to eukaryotic snRNP
L2_023_126G1_scaffold_16_21
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16140..17018
DNA (879bp) protein (293aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RSV5_9FIRM
TIGR00255 family protein {ECO:0000313|EMBL:EPD60005.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
conserved hypothetical protein TIGR00255
L2_023_126G1_scaffold_16_22
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17073..17708
DNA (636bp) protein (212aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=4 Tax=Lachnospiraceae RepID=E9RSV6_9FIRM
L2_023_126G1_scaffold_16_23
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17710..17955
DNA (246bp) protein (82aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
DNA-directed RNA polymerase, omega subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=4 Tax=Lachnospiraceae RepID=E9RSV7_9FIRM
L2_023_126G1_scaffold_16_24
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18015..19337
DNA (1323bp) protein (441aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
SSU ribosomal protein S12P methylthiotransferase (EC:1.3.1.74 2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZNG4_9FIRM
L2_023_126G1_scaffold_16_25
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19337..19888
DNA (552bp) protein (184aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Lachnospiraceae RepID=E9RSV9_9FIRM
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EGC75712.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L2_023_126G1_scaffold_16_26
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20077..20562
DNA (486bp) protein (162aa)
Competence/damage-inducible protein CinA domain n=2 Tax=Lachnospiraceae RepID=S2YCK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87569.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
competence/damage-inducible protein CinA C-terminal domain
L2_023_126G1_scaffold_16_27
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20760..21452
DNA (693bp) protein (231aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RSW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87568.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_16_28
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21497..22507
DNA (1011bp) protein (337aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RSW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75715.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L2_023_126G1_scaffold_16_29
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22786..23859
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YLT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65453.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Fe-S oxidoreductase
L2_023_126G1_scaffold_16_30
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23965..24387
DNA (423bp) protein (141aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RSW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87543.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hemerythrin-like metal-binding domain
Displaying items 1-30 of 110 in total

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