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L2_023_126G1_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_40_1
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

403..915
DNA (513bp) protein (171aa)
Transcriptional regulator n=4 Tax=Clostridium butyricum RepID=B1QV20_CLOBU
Transcriptional repressor for NAD biosynthesis in gram-positive {ECO:0000313|EMBL:KJZ92178.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
niaR; transcription repressor NiaR
L2_023_126G1_scaffold_40_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

928..2334
DNA (1407bp) protein (469aa)
FAD dependent oxidoreductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K172_CLOBU
Dehydrogenase {ECO:0000313|EMBL:KHD15092.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
FAD dependent oxidoreductase
L2_023_126G1_scaffold_40_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2355..2585
DNA (231bp) protein (77aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QV22_CLOBU
No significant {ECO:0000313|EMBL:KJZ84718.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_023_126G1_scaffold_40_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3007..4287
DNA (1281bp) protein (427aa)
Seryl-tRNA synthetase n=4 Tax=Clostridium butyricum RepID=B1QV23_CLOBU
Serine-tRNA ligase {ECO:0000313|EMBL:ENZ29694.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
SerS; seryl-tRNA synthetase
L2_023_126G1_scaffold_40_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5494..5997
DNA (504bp) protein (168aa)
Acetyltransferase, GNAT family {ECO:0000313|EMBL:KJZ84727.1}; EC=2.3.1.- {ECO:0000313|EMBL:KJZ84727.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
GCN5-related N-acetyltransferase n=2 Tax=Clostridium butyricum RepID=M8JFV1_CLOBU
GNAT family acetyltransferase
L2_023_126G1_scaffold_40_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6016..9483
DNA (3468bp) protein (1156aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044573}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044602};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044578};; ATP-dependent helicase/nuclease AddB {ECO:0000256|HAMAP-Rule:MF_01452}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
addB; ATP-dependent helicase/deoxyribonuclease subunit B (EC:3.1.-.- 3.6.4.12)
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AC58_CLOBU
L2_023_126G1_scaffold_40_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9535..13293
DNA (3759bp) protein (1253aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
addA; ATP-dependent helicase/nuclease subunit A (EC:3.1.-.- 3.6.4.12)
UPI0003D5F9AD related cluster n=1 Tax=unknown RepID=UPI0003D5F9AD
L2_023_126G1_scaffold_40_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13399..14580)
DNA (1182bp) protein (394aa)
ErfK/YbiS/YcfS/YnhG family protein n=2 Tax=Clostridium butyricum RepID=B1QV27_CLOBU
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EEP52560.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative L,D-transpeptidase
L2_023_126G1_scaffold_40_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14788..15585
DNA (798bp) protein (266aa)
UPI00039A38E2 related cluster n=1 Tax=unknown RepID=UPI00039A38E2
Uncharacterized protein {ECO:0000313|EMBL:KJZ91721.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_023_126G1_scaffold_40_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15723..17009)
DNA (1287bp) protein (429aa)
UPI0003D62B53 related cluster n=1 Tax=unknown RepID=UPI0003D62B53
Sodium:dicarboxylate symporter family protein {ECO:0000313|EMBL:ETI91798.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
sodium:dicarboxylate symporter family protein
L2_023_126G1_scaffold_40_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17236..17337
DNA (102bp) protein (34aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI91797.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_023_126G1_scaffold_40_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17276..18160
DNA (885bp) protein (295aa)
Periplasmic sensor signal transduction histidine kinase n=3 Tax=Clostridium butyricum RepID=B1R229_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84665.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
histidine kinase
L2_023_126G1_scaffold_40_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18571..19707
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K161_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29685.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_023_126G1_scaffold_40_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19753..20646)
DNA (894bp) protein (298aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00093350};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
psd1; phosphatidylserine decarboxylase proenzyme (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9A0_CLOBU
L2_023_126G1_scaffold_40_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20925..21497
DNA (573bp) protein (191aa)
Transcriptional regulator, TetR family n=4 Tax=Clostridium butyricum RepID=B1R218_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84703.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transcriptional regulator, TetR family
L2_023_126G1_scaffold_40_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21657..23381
DNA (1725bp) protein (575aa)
iron hydrogenase 1 (EC:1.12.7.2)
Hydrogenase-1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JFU1_CLOBU
[FeFe] hydrogenase, group A {ECO:0000313|EMBL:ENZ29682.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_023_126G1_scaffold_40_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23610..24407
DNA (798bp) protein (266aa)
Cof-like hydrolase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YPZ8_CLOBU
Cof-like hydrolase {ECO:0000313|EMBL:ENZ29681.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HAD family hydrolase
L2_023_126G1_scaffold_40_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24448..26037)
DNA (1590bp) protein (530aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8K157_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29680.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC transporter ATP-binding protein
L2_023_126G1_scaffold_40_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26235..27935)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K996_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29679.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_023_126G1_scaffold_40_20
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27938..28531)
DNA (594bp) protein (198aa)
UPI0003D5D045 related cluster n=1 Tax=unknown RepID=UPI0003D5D045
Uncharacterized protein {ECO:0000313|EMBL:KJZ97170.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_023_126G1_scaffold_40_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28754..29401
DNA (648bp) protein (216aa)
Hemolysin-3 n=4 Tax=Clostridium butyricum RepID=B1R212_CLOBU
Membrane protein {ECO:0000313|EMBL:KJZ84671.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hemolysin III family channel protein
L2_023_126G1_scaffold_40_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29465..30814)
DNA (1350bp) protein (450aa)
Membrane protein n=4 Tax=Clostridium butyricum RepID=B1R211_CLOBU
Membrane protein {ECO:0000313|EMBL:EEP52542.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
membrane protein
L2_023_126G1_scaffold_40_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31065..31877
DNA (813bp) protein (271aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
proB; glutamate 5-kinase ProB (EC:2.7.2.11)
Glutamate 5-kinase n=4 Tax=Clostridium butyricum RepID=B1R210_CLOBU
L2_023_126G1_scaffold_40_24
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31983..33227
DNA (1245bp) protein (415aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
proA; gamma-glutamyl phosphate reductase ProA (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K992_CLOBU
L2_023_126G1_scaffold_40_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33442..33801
DNA (360bp) protein (120aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
mgsA; methylglyoxal synthase MgsA (EC:4.2.3.3)
Methylglyoxal synthase n=2 Tax=Clostridium butyricum RepID=B1R208_CLOBU
L2_023_126G1_scaffold_40_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34080..35534
DNA (1455bp) protein (485aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0AC18_CLOBU
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EEP52505.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
methyl-accepting chemotaxis protein
L2_023_126G1_scaffold_40_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35962..37011
DNA (1050bp) protein (350aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
carA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=4 Tax=Clostridium butyricum RepID=B1R206_CLOBU
L2_023_126G1_scaffold_40_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37026..40238
DNA (3213bp) protein (1071aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=2 Tax=Clostridium butyricum RepID=M8K148_CLOBU
L2_023_126G1_scaffold_40_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40374..40610
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R204_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52508.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_023_126G1_scaffold_40_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40689..41798)
DNA (1110bp) protein (370aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J5I7_CLOBU
HD-GYP hydrolase protein {ECO:0000313|EMBL:ETI91778.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
metal dependent phosphohydrolase
Displaying items 1-30 of 117 in total

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