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L2_023_126G1_scaffold_43

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Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_43_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6..599)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77573.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_43_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(855..1931)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77846.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Ribosomal protein S1
L2_023_126G1_scaffold_43_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1912..2790)
DNA (879bp) protein (293aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKJ4_9FIRM
L2_023_126G1_scaffold_43_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2809..3480)
DNA (672bp) protein (224aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAR5_9FIRM
L2_023_126G1_scaffold_43_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3621..4964)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78150.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved hypothetical protein TIGR00275
L2_023_126G1_scaffold_43_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5182..6594)
DNA (1413bp) protein (471aa)
Pyruvate/oxaloacetate carboxyltransferase (EC:4.1.1.3)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77704.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_126G1_scaffold_43_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6737..7885)
DNA (1149bp) protein (383aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3 4.1.1.70)
Sodium ion-translocating decarboxylase, beta subunit n=2 Tax=Ruminococcus RepID=C6JAR8_9FIRM
Sodium ion-translocating decarboxylase, beta subunit {ECO:0000313|EMBL:EES77705.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_126G1_scaffold_43_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7902..8270)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CK73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78147.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Acetyl/propionyl-CoA carboxylase, alpha subunit
L2_023_126G1_scaffold_43_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8298..9053)
DNA (756bp) protein (252aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Oxaloacetate decarboxylase gamma chain n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJC9_9FIRM
sodium pump decarboxylases, gamma subunit
L2_023_126G1_scaffold_43_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9068..10504)
DNA (1437bp) protein (479aa)
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:6.4.1.3)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77708.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_126G1_scaffold_43_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11064..13061
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78143.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L2_023_126G1_scaffold_43_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13101..13979
DNA (879bp) protein (293aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Shikimate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CK67_9FIRM
aroE; shikimate 5-dehydrogenase
L2_023_126G1_scaffold_43_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14025..14786
DNA (762bp) protein (254aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAS5_9FIRM
L2_023_126G1_scaffold_43_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14967..16325)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78140.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_023_126G1_scaffold_43_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16605..17804)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78139.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Arabinose efflux permease
L2_023_126G1_scaffold_43_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17825..18709)
DNA (885bp) protein (295aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLB4_9FIRM
L2_023_126G1_scaffold_43_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18938..20863)
DNA (1926bp) protein (642aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CK62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78137.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L2_023_126G1_scaffold_43_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20993..21835)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78136.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Xylose isomerase-like TIM barrel.
L2_023_126G1_scaffold_43_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22134..23042
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77729.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LysR family transcriptional regulator
L2_023_126G1_scaffold_43_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23194..23982)
DNA (789bp) protein (263aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CK56_9FIRM
L2_023_126G1_scaffold_43_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24240..25472)
DNA (1233bp) protein (411aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77731.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_126G1_scaffold_43_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25653..26447)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78128.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_023_126G1_scaffold_43_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26467..27036)
DNA (570bp) protein (190aa)
Segregation and condensation protein B n=2 Tax=Ruminococcus RepID=C6JAU7_9FIRM
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
segregation and condensation protein B
L2_023_126G1_scaffold_43_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27080..27871)
DNA (792bp) protein (264aa)
Segregation and condensation protein A n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJI2_9FIRM
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_023_126G1_scaffold_43_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27939..28748)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78124.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted phosphohydrolases
L2_023_126G1_scaffold_43_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28807..29841)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78123.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Molybdopterin biosynthesis enzyme
L2_023_126G1_scaffold_43_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29992..31191)
DNA (1200bp) protein (400aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77738.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_126G1_scaffold_43_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31473..33071)
DNA (1599bp) protein (533aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Cardiolipin synthetase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJ95_9FIRM
Cardiolipin synthetase {ECO:0000313|EMBL:CDD78121.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_023_126G1_scaffold_43_29
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

comp(33150..33326)
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=1 Tax=Blautia sp. KLE 1732 RepID=U2DL38_9FIRM
SSU ribosomal protein S21P
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
L2_023_126G1_scaffold_43_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(33616..36255)
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIR3_9FIRM
Displaying items 1-30 of 129 in total

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