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L2_023_126G1_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_55_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(158..1072)
DNA (915bp) protein (305aa)
Chemotaxis protein CheV n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6S9_CLOBU
Chemotaxis protein CheV {ECO:0000313|EMBL:EEP53602.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
cheV; chemotaxis protein CheV
L2_023_126G1_scaffold_55_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1183..2346)
DNA (1164bp) protein (388aa)
Methyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KF23_CLOBU
Methyltransferase {ECO:0000313|EMBL:EEP54373.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
methyltransferase TRM13 family protein
L2_023_126G1_scaffold_55_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2776..4392
DNA (1617bp) protein (539aa)
Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Clostridium butyricum DKU-01 RepID=M8JB40_CLOBU
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domain) with PAS/PAC sensor(S) {ECO:0000313|EMBL:KJZ88249.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
diguanylate cyclase/phosphodiesterase
L2_023_126G1_scaffold_55_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4479..4946)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARG1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88308.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_023_126G1_scaffold_55_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5014..7746)
DNA (2733bp) protein (911aa)
Mg(2+) transport ATPase, P-type {ECO:0000313|EMBL:KJZ88268.1}; EC=3.6.3.2 {ECO:0000313|EMBL:KJZ88268.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Magnesium-importing ATPase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK74_CLOBU
magnesium-translocating P-type ATPase
L2_023_126G1_scaffold_55_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7934..8437)
DNA (504bp) protein (168aa)
Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=M8K6S4_CLOBU
Two-component system response regulator {ECO:0000313|EMBL:ENZ35351.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
winged helix family two component response transcriptional regulator
L2_023_126G1_scaffold_55_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8454..11123)
DNA (2670bp) protein (890aa)
Mg(2+) transport ATPase, P-type {ECO:0000313|EMBL:KJZ88266.1}; EC=3.6.3.2 {ECO:0000313|EMBL:KJZ88266.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
mgtA1; Magnesium-transporting ATPase, P-type 1;Tn916-like, CTn7-Orf12 (EC:3.6.3.2)
Magnesium-translocating P-type ATPase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATI1_CLOBU
L2_023_126G1_scaffold_55_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11576..13897
DNA (2322bp) protein (774aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Alpha-amylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JB34_CLOBU
amyA; Alpha-amylase
L2_023_126G1_scaffold_55_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14151..14693)
DNA (543bp) protein (181aa)
Acetyltransferases, including N-acetylases of ribosomal proteins (EC:2.3.1.128)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JLG9_CLOBU
Ribosomal-protein-S5p-alanine acetyltransferase {ECO:0000313|EMBL:KJZ88326.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_023_126G1_scaffold_55_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14749..15282)
DNA (534bp) protein (178aa)
5-nitroimidazole antibiotic resistance protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK70_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88355.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
5-nitroimidazole antibiotic resistance protein
L2_023_126G1_scaffold_55_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15462..15758)
DNA (297bp) protein (99aa)
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:KJZ95167.1}; EC=1.1.1.125 {ECO:0000313|EMBL:KJZ95167.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QSK0_CLOBU
hypothetical protein
L2_023_126G1_scaffold_55_12
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16028..16750)
DNA (723bp) protein (241aa)
Peptidase C1A papain n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TDI7_9CLOT
Peptidase C1A papain {ECO:0000313|EMBL:EGD47625.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
cysteine protease
L2_023_126G1_scaffold_55_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16921..18219)
DNA (1299bp) protein (433aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hisS; histidine--tRNA ligase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KF16_CLOBU
L2_023_126G1_scaffold_55_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18559..19899)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AG56_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88280.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_023_126G1_scaffold_55_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20034..20684)
DNA (651bp) protein (217aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyl/phenylalanyl-tRNA--protein transferase; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
aat; leucyl/phenylalanyl-tRNA--protein transferase Aat (EC:2.3.2.6)
UPI0003D60F49 related cluster n=1 Tax=unknown RepID=UPI0003D60F49
L2_023_126G1_scaffold_55_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20705..21007)
DNA (303bp) protein (101aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QSK4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88364.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_023_126G1_scaffold_55_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21362..21544
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMX1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34119.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_023_126G1_scaffold_55_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21721..25236)
DNA (3516bp) protein (1172aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
nifJ1; pyruvate-flavodoxin oxidoreductase NifJ (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z385_CLOBU
L2_023_126G1_scaffold_55_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25524..26117)
DNA (594bp) protein (198aa)
Putative cell wall binding repeat-containing protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KF13_CLOBU
Transglutaminase-like protein {ECO:0000313|EMBL:KJZ88345.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
leucine rich repeat protein
L2_023_126G1_scaffold_55_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26314..28236)
DNA (1923bp) protein (641aa)
fruA: PTS system fructose-specific EIIABC component (EC:2.7.1.- 2.7.1.69)
PTS system, Fru family, IIC component n=1 Tax=Clostridium butyricum 60E.3 RepID=R0APV6_CLOBU
PTS system, Fru family, IIC component {ECO:0000313|EMBL:ENZ34122.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_023_126G1_scaffold_55_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28382..29287)
DNA (906bp) protein (302aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
fruK; 1-phosphofructokinase FruK (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACM6_CLOBU
L2_023_126G1_scaffold_55_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29289..30032)
DNA (744bp) protein (248aa)
Lactose phosphotransferase system repressor n=2 Tax=Clostridium butyricum RepID=M8JK60_CLOBU
Transcriptional repressor of the fructose operon, DeoR family {ECO:0000313|EMBL:KJZ88338.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
fruR; HTH-type transcriptional regulator FruR
L2_023_126G1_scaffold_55_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30172..31020)
DNA (849bp) protein (283aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z391_CLOBU
phosphomethylpyrimidine kinase type-1
L2_023_126G1_scaffold_55_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31285..32820)
DNA (1536bp) protein (512aa)
Polygalacturonase {ECO:0000313|EMBL:KJZ88317.1}; EC=3.2.1.15 {ECO:0000313|EMBL:KJZ88317.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2J4_CLOBU
glycoside hydrolase family protein
L2_023_126G1_scaffold_55_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32936..34444)
DNA (1509bp) protein (503aa)
Oligogalacturonide transporter n=2 Tax=Clostridium butyricum RepID=M8JB21_CLOBU
Permease of the Na:galactoside symporter family {ECO:0000313|EMBL:KJZ88320.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
major facilitator superfamily protein
L2_023_126G1_scaffold_55_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34629..34814)
DNA (186bp) protein (62aa)
Polysaccharide deacetylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLF3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95171.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative xylanase/chitin deacetylase
L2_023_126G1_scaffold_55_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34818..35477)
DNA (660bp) protein (220aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QSL4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53399.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_023_126G1_scaffold_55_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35595..36791)
DNA (1197bp) protein (399aa)
Glycosyl hydrolase, family 88 n=4 Tax=Clostridium butyricum RepID=B1QSL5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88327.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative unsaturated glucuronyl hydrolase
L2_023_126G1_scaffold_55_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37054..37917
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2K0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34131.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
eamA-like transporter family protein
L2_023_126G1_scaffold_55_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38018..38800)
DNA (783bp) protein (261aa)
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:KJZ88344.1}; EC=1.1.1.125 {ECO:0000313|EMBL:KJZ88344.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0APW9_CLOBU
2-deoxy-D-gluconate 3-dehydrogenase
Displaying items 1-30 of 105 in total

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