ggKbase home page

L2_023_126G1_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_57_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

483..1841
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A2Y1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97261.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
retron-type reverse transcriptase
L2_023_126G1_scaffold_57_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2244..3032
DNA (789bp) protein (263aa)
Electron transfer flavoprotein, beta subunit n=3 Tax=Clostridium butyricum RepID=B1R053_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30374.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
electron transfer flavoprotein, alpha/beta-subunit-like protein
L2_023_126G1_scaffold_57_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3081..4271
DNA (1191bp) protein (397aa)
Electron transfer flavoprotein, alpha subunit n=3 Tax=Clostridium butyricum RepID=B1R054_CLOBU
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:KJZ83379.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
etfA2; electron transfer flavoprotein subunit alpha
L2_023_126G1_scaffold_57_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4276..5685
DNA (1410bp) protein (470aa)
Glycolate dehydrogenase {ECO:0000313|EMBL:KJZ83376.1}; EC=1.1.99.14 {ECO:0000313|EMBL:KJZ83376.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Glycolate oxidase, subunit GlcD n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRY9_CLOBU
glcD1; glycolate oxidase subunit GlcD
L2_023_126G1_scaffold_57_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5891..7180
DNA (1290bp) protein (430aa)
SEC-C motif domain protein n=2 Tax=Clostridium butyricum RepID=B1R056_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ90906.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
SEC-C motif domain protein
L2_023_126G1_scaffold_57_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7349..8290
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1L0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ90915.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
putative deacylase
L2_023_126G1_scaffold_57_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8283..9218
DNA (936bp) protein (312aa)
Succinylglutamate desuccinylase/aspartoacylase family protein n=2 Tax=Clostridium butyricum RepID=C4IEP9_CLOBU
Succinylglutamate desuccinylase {ECO:0000313|EMBL:KHD14289.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
succinylglutamate desuccinylase/aspartoacylase
L2_023_126G1_scaffold_57_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9450..10130
DNA (681bp) protein (227aa)
Ribosomal small subunit pseudouridine synthase A {ECO:0000313|EMBL:KJZ97302.1}; EC=4.2.1.70 {ECO:0000313|EMBL:KJZ97302.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=2 Tax=Clostridium butyricum RepID=B1R059_CLOBU
walR1; transcriptional regulatory protein WalR
L2_023_126G1_scaffold_57_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10163..11599
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
yclK2; sensor histidine kinase YclK (EC:2.7.13.3)
Two-component sensor histidine kinase n=2 Tax=Clostridium butyricum RepID=B1R060_CLOBU
L2_023_126G1_scaffold_57_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11682..12518
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R061_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55468.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_023_126G1_scaffold_57_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12548..13594
DNA (1047bp) protein (349aa)
ABC transporter substrate-binding protein n=2 Tax=Clostridium butyricum RepID=B1R062_CLOBU
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EEP55111.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ABC transporter substrate-binding protein
L2_023_126G1_scaffold_57_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13672..15090
DNA (1419bp) protein (473aa)
Hexose phosphate transport protein n=2 Tax=Clostridium butyricum RepID=B1R063_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97282.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
uhpT; hexose phosphate transport protein UhpT
L2_023_126G1_scaffold_57_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15277..16344
DNA (1068bp) protein (356aa)
manC; mannose-1-phosphate guanylyltransferase ManC (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K226_CLOBU
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KHD14284.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_023_126G1_scaffold_57_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16404..17129)
DNA (726bp) protein (242aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridium butyricum RepID=B1R065_CLOBU
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEP55430.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
GntR family transcriptional regulator
L2_023_126G1_scaffold_57_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17531..18706
DNA (1176bp) protein (392aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE16_CLOBU
N-acetylglucosamine-6-phosphate deacetylase
L2_023_126G1_scaffold_57_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18774..21533
DNA (2760bp) protein (920aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1L3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30383.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NtrC family Transcriptional regulator, ATPase domain
L2_023_126G1_scaffold_57_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21730..22035
DNA (306bp) protein (102aa)
PTS system, cellobiose-specific IIB component {ECO:0000313|EMBL:KJZ83403.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ83403.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Lichenan-specific phosphotransferase enzyme iib component n=2 Tax=Clostridium butyricum RepID=B1R068_CLOBU
phosphotransferase system, lactose/cellobiose-specific IIB subunit
L2_023_126G1_scaffold_57_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22088..22387
DNA (300bp) protein (100aa)
Lichenan-specific phosphotransferase enzyme iia component {ECO:0000313|EMBL:EEP55601.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEP55601.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Lichenan-specific phosphotransferase enzyme iia component n=3 Tax=Clostridium butyricum RepID=B1R069_CLOBU
PTS system lactose/cellobiose-specific transporter subunit IIA
L2_023_126G1_scaffold_57_19
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22420..23328
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRZ9_CLOBU
N-acetylglucosamine kinase-like protein {ECO:0000313|EMBL:KJZ90922.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
BadF/BadG/BcrA/BcrD type ATPase
L2_023_126G1_scaffold_57_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23330..24418
DNA (1089bp) protein (363aa)
Outer surface protein n=3 Tax=Clostridium butyricum RepID=B1R071_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83389.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
outer surface protein
L2_023_126G1_scaffold_57_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24454..25725
DNA (1272bp) protein (424aa)
Lichenan permease iic component n=2 Tax=Clostridium butyricum RepID=B1R072_CLOBU
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
PTS system lactose/cellobiose family transporter subunit IIC
L2_023_126G1_scaffold_57_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26079..26687
DNA (609bp) protein (203aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R073_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30389.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_023_126G1_scaffold_57_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26847..27212
DNA (366bp) protein (122aa)
Cadmium efflux system accessory protein n=3 Tax=Clostridium butyricum RepID=B1R074_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83400.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
cadmium efflux system accessory protein
L2_023_126G1_scaffold_57_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27297..29762
DNA (2466bp) protein (822aa)
Cadmium-transporting ATPase {ECO:0000313|EMBL:KJZ83374.1}; EC=3.6.3.3 {ECO:0000313|EMBL:KJZ83374.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Cadmium-exporting ATPase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J6G1_CLOBU
heavy metal translocating P-type ATPase
L2_023_126G1_scaffold_57_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29938..30507
DNA (570bp) protein (190aa)
Putative manganese efflux pump MntP n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE26_CLOBU
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mntP1; putative manganese efflux pump MntP 2
L2_023_126G1_scaffold_57_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30756..31391
DNA (636bp) protein (212aa)
Redox-sensing transcriptional repressor Rex n=4 Tax=Clostridium butyricum RepID=B1R077_CLOBU
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rex; redox-sensing transcriptional repressor Rex
L2_023_126G1_scaffold_57_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31747..32532
DNA (786bp) protein (262aa)
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:EEP55173.1}; EC=4.2.1.55 {ECO:0000313|EMBL:EEP55173.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
crt; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase n=4 Tax=Clostridium butyricum RepID=B1R078_CLOBU
L2_023_126G1_scaffold_57_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32610..33749
DNA (1140bp) protein (380aa)
bcd1; acyl-CoA dehydrogenase, short-chain specific (EC:1.3.8.1)
Acyl-CoA dehydrogenase, short-chain specific n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSH8_CLOBU
Acyl-CoA dehydrogenase protein {ECO:0000313|EMBL:ETI91590.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_023_126G1_scaffold_57_29
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33763..34542
DNA (780bp) protein (260aa)
Electron transfer flavoprotein, beta subunit n=2 Tax=Clostridium butyricum RepID=M8J6F6_CLOBU
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:KJZ90936.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
electron transfer flavoprotein, alpha/beta-subunit-like protein
L2_023_126G1_scaffold_57_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34565..35572
DNA (1008bp) protein (336aa)
Electron transfer flavoprotein, alpha subunit n=2 Tax=Clostridium butyricum RepID=M8JGM5_CLOBU
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:KJZ83396.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
fixB2; protein FixB
Displaying items 1-30 of 61 in total

View Taxonomy