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L2_023_126G1_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_111_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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230..502
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77228.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_111_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(602..1198)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77216.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_023_126G1_scaffold_111_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1347..2717)
DNA (1371bp) protein (457aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHK1_9FIRM
L2_023_126G1_scaffold_111_4

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comp(2803..3855)
DNA (1053bp) protein (351aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=2 Tax=Bacteria RepID=G8FXJ9_9BACT
L2_023_126G1_scaffold_111_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3868..5106)
DNA (1239bp) protein (413aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CG75_9FIRM
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:CDD77219.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_023_126G1_scaffold_111_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5506..6795)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77220.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator
L2_023_126G1_scaffold_111_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7438..8790)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77223.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative exopolysaccharide biosynthesis protein
L2_023_126G1_scaffold_111_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8814..9791)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77236.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
M1_3947; hypothetical protein
L2_023_126G1_scaffold_111_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10367..11248)
DNA (882bp) protein (294aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77226.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_023_126G1_scaffold_111_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11367..12224)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77238.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted SAM-dependent methyltransferases
L2_023_126G1_scaffold_111_11
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(12614..13336)
DNA (723bp) protein (241aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Gardnerella vaginalis JCP8108 RepID=S4GTB4_GARVA
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EPI48744.1}; TaxID=1261066 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP8108.;"
cyclic nucleotide-binding domain-containing protein
L2_023_126G1_scaffold_111_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13305..13982)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3D9E7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF23170.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L2_023_126G1_scaffold_111_13
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14111..15283)
DNA (1173bp) protein (391aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=3 Tax=Lachnospiraceae RepID=C9L492_BLAHA
L2_023_126G1_scaffold_111_14
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15299..16000)
DNA (702bp) protein (234aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031BDECF
deoD; purine nucleoside phosphorylase
L2_023_126G1_scaffold_111_15
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16021..17142)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JSQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37259.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
nucleoside 2-deoxyribosyltransferase
L2_023_126G1_scaffold_111_16
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17153..18100)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003129CAD
Uncharacterized protein {ECO:0000313|EMBL:EOS37260.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hydrolase
L2_023_126G1_scaffold_111_17
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18200..18613)
DNA (414bp) protein (138aa)
Secondary thiamine-phosphate synthase enzyme n=2 Tax=Clostridium RepID=D3AEN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ63434.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L2_023_126G1_scaffold_111_18
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18636..19775)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K199_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37262.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
glucosamine--fructose-6-phosphate aminotransferase
L2_023_126G1_scaffold_111_19
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19805..20722)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JT25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37263.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
uridine phosphorylase
L2_023_126G1_scaffold_111_20
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20709..21599)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JSR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37264.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
carbohydrate kinase, PfkB family
L2_023_126G1_scaffold_111_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21601..23694)
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XEY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98237.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
large exoproteins involved in heme utilization or adhesion
L2_023_126G1_scaffold_111_22
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23719..25836)
DNA (2118bp) protein (706aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JTL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37266.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
large exoproteins involved in heme utilization or adhesion
L2_023_126G1_scaffold_111_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25879..26721)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W5W1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98239.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
sugar ABC transporter permease
L2_023_126G1_scaffold_111_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26737..27612)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W5I2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98240.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
sugar-binding transport system permease protein
L2_023_126G1_scaffold_111_25
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27730..29223)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JSR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37269.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
N-acetyl-D-glucosamine ABC transport system, sugar-binding protein
L2_023_126G1_scaffold_111_26
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29589..30644)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JSW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37270.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
PurR2; transcriptional regulator
L2_023_126G1_scaffold_111_27
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30675..32378)
DNA (1704bp) protein (568aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
Adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DCP6_9FIRM
L2_023_126G1_scaffold_111_28
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32615..33394)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI00035DCE5F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR11673.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" source="Teredinibacter turnerae (strain ATCC 39867 / T7901).;"
L2_023_126G1_scaffold_111_29
unknown

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comp(33418..38124)
DNA (4707bp) protein (1569aa)

This feature has no annotations

L2_023_126G1_scaffold_111_30
unknown

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comp(38128..42051)
DNA (3924bp) protein (1308aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

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