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L2_023_126G1_scaffold_153

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_153_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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128..1018
DNA (891bp) protein (297aa)
TIGR00159 family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDW8_9FIRM
TIGR00159 family protein {ECO:0000313|EMBL:EES76867.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
conserved hypothetical protein TIGR00159
L2_023_126G1_scaffold_153_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

993..2315
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76866.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_153_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2368..2631
DNA (264bp) protein (88aa)
HPr family phosphocarrier n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDW6_9FIRM
HPr family phosphocarrier {ECO:0000313|EMBL:EES76865.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Phosphotransferase System HPr (HPr) Family
L2_023_126G1_scaffold_153_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2702..5302
DNA (2601bp) protein (867aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79688.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
FOG: Glucan-binding domain (YG repeat)
L2_023_126G1_scaffold_153_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5502..6959
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76863.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L2_023_126G1_scaffold_153_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7051..7413)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76862.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
EamA-like transporter family.
L2_023_126G1_scaffold_153_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7382..7732)
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JDW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76861.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
EamA-like transporter family.
L2_023_126G1_scaffold_153_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7925..8860
DNA (936bp) protein (312aa)
Glycosyltransferases involved in cell wall biogenesis (EC:2.7.8.- 2.4.1.83)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JDW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76860.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_126G1_scaffold_153_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8860..9822
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76859.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_153_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9819..11117
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76858.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Carbamoylphosphate synthase large subunit (split gene in MJ)
L2_023_126G1_scaffold_153_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11110..12240
DNA (1131bp) protein (377aa)
Lipopolysaccharide biosynthesis protein RffA n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR51_9FIRM
Lipopolysaccharide biosynthesis protein RffA {ECO:0000313|EMBL:CDD80147.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
TDP-4-keto-6-deoxy-D-glucose transaminase
L2_023_126G1_scaffold_153_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12326..13627
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76856.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
D-alanyl-D-alanine carboxypeptidase
L2_023_126G1_scaffold_153_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13704..14258
DNA (555bp) protein (185aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=2 Tax=Ruminococcus RepID=C6JDV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80143.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_023_126G1_scaffold_153_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14271..15086
DNA (816bp) protein (272aa)
ABC-2 type transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQC3_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L2_023_126G1_scaffold_153_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15260..16540
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80139.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L2_023_126G1_scaffold_153_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16596..18788
DNA (2193bp) protein (731aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76852.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Dimethyladenosine transferase (rRNA methylation)
L2_023_126G1_scaffold_153_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18755..21298
DNA (2544bp) protein (848aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76851.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted glycosyltransferases
L2_023_126G1_scaffold_153_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21300..23744
DNA (2445bp) protein (815aa)
Glycosyl transferase n=1 Tax=Ruminococcus sp. CAG:9 PF3_9FIRM">RepID=R7CPF3_9FIRM
Glycosyl transferase {ECO:0000313|EMBL:CDD80134.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted glycosyltransferases
L2_023_126G1_scaffold_153_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23763..25223
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76849.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted membrane protein (DUF2142).
L2_023_126G1_scaffold_153_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25321..26601)
DNA (1281bp) protein (427aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76848.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_126G1_scaffold_153_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26779..28686
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76847.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted glycosyltransferases
L2_023_126G1_scaffold_153_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28668..29624
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76846.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted glycosyltransferases
L2_023_126G1_scaffold_153_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29708..31111
DNA (1404bp) protein (468aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDU6_9FIRM
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:EES76845.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Undecaprenyl-phosphate glucose phosphotransferase
L2_023_126G1_scaffold_153_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31129..32547
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80128.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
cell envelope-related function transcriptional attenuator common domain
L2_023_126G1_scaffold_153_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32636..33580
DNA (945bp) protein (315aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JDU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80127.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L2_023_126G1_scaffold_153_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33777..35192
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80126.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L2_023_126G1_scaffold_153_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35406..36824
DNA (1419bp) protein (473aa)
ATP-dependent Clp protease, ATP-binding subunit ClpX n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDU2_9FIRM
ATP-dependent Clp protease, ATP-binding subunit ClpX {ECO:0000313|EMBL:EES76841.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L2_023_126G1_scaffold_153_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36880..37467
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76840.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_153_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37606..39111
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80121.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
N-acetylmuramoyl-L-alanine amidase
L2_023_126G1_scaffold_153_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39267..40394
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80120.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
N-acetylmuramoyl-L-alanine amidase
Displaying items 1-30 of 46 in total

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