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L2_023_126G1_scaffold_176

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_176_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(346..828)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79241.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Bacterial SH3 domain.
L2_023_126G1_scaffold_176_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1028..2023)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77966.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
L2_023_126G1_scaffold_176_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2106..3317
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CM36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79239.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Na+/H+-dicarboxylate symporters
L2_023_126G1_scaffold_176_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3375..3989)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79238.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
selenium metabolism protein YedF
L2_023_126G1_scaffold_176_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4083..5456)
DNA (1374bp) protein (458aa)
dihydropyrimidinase (EC:3.5.2.2)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79236.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_023_126G1_scaffold_176_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5823..6455
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77970.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_176_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6786..7205
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CM29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79234.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_023_126G1_scaffold_176_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7347..8054
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77971.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_176_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8124..8486
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBI5_9FIRM
Response regulator receiver protein {ECO:0000313|EMBL:CDD79233.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Response regulator of the LytR/AlgR family
L2_023_126G1_scaffold_176_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8933..9118)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79231.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_023_126G1_scaffold_176_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9481..10008
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77974.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_176_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10290..11309)
DNA (1020bp) protein (340aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=2 Tax=Ruminococcus RepID=C6JBI8_9FIRM
L2_023_126G1_scaffold_176_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11438..11935)
DNA (498bp) protein (166aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=2 Tax=Ruminococcus RepID=C6JBI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79226.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_023_126G1_scaffold_176_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12164..13216)
DNA (1053bp) protein (351aa)
Protein tyrosine/serine phosphatase (EC:3.1.3.48)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CLZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79224.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_023_126G1_scaffold_176_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13462..14406
DNA (945bp) protein (315aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79223.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted permeases
L2_023_126G1_scaffold_176_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14424..15233)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79221.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
HAD-superfamily hydrolase, subfamily IIB
L2_023_126G1_scaffold_176_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15287..16555)
DNA (1269bp) protein (423aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
M18 family aminopeptidase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBJ4_9FIRM
Aspartyl aminopeptidase
L2_023_126G1_scaffold_176_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16682..17008)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77982.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Cupin domain.
L2_023_126G1_scaffold_176_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17145..17996)
DNA (852bp) protein (284aa)
dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:4.1.2.25)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBJ6_9FIRM
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:EES77983.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_126G1_scaffold_176_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18054..18863)
DNA (810bp) protein (270aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Dihydropteroate synthase (EC:2.5.1.15)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP43_9FIRM
L2_023_126G1_scaffold_176_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18903..19400)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77985.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
uncharacterized domain HDIG
L2_023_126G1_scaffold_176_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19397..19954)
DNA (558bp) protein (186aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBJ9_9FIRM
L2_023_126G1_scaffold_176_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20303..20716)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77989.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
YolD-like protein.
L2_023_126G1_scaffold_176_24
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20732..22261)
DNA (1530bp) protein (510aa)
ImpB/MucB/SamB family protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2DM64_9FIRM
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:ERI97895.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L2_023_126G1_scaffold_176_25
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22295..22750)
DNA (456bp) protein (152aa)
UPF0178 protein CK1_27050 n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LLA4_9FIRM
hypothetical protein
UPF0178 protein CK1_27050 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_023_126G1_scaffold_176_26
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22761..23183)
DNA (423bp) protein (141aa)
glyoxalase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003103BF4
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily {ECO:0000313|EMBL:CBL20616.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_023_126G1_scaffold_176_27
unknown

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comp(23389..23664)
DNA (276bp) protein (92aa)

This feature has no annotations

L2_023_126G1_scaffold_176_28
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23685..24695)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5ELW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX89657.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
hypothetical protein
L2_023_126G1_scaffold_176_29
unknown

Not on your lists

24891..25367
DNA (477bp) protein (159aa)

This feature has no annotations

L2_023_126G1_scaffold_176_30
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25429..26079)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AQW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ28843.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
Displaying items 1-30 of 46 in total

View Taxonomy