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L2_023_126G1_scaffold_198

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_198_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(63..455)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z868_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75085.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_023_126G1_scaffold_198_2
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(471..1403)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BKL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD66361.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L2_023_126G1_scaffold_198_3
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1420..2043)
DNA (624bp) protein (208aa)
Uncharacterized protein id=1935056 bin=GWD2_Clostridiales_32_59 species=Desulfitobacterium dehalogenans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL99808.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
L2_023_126G1_scaffold_198_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2076..4058)
DNA (1983bp) protein (661aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58244.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Restriction endonuclease, type II, LlaJI
L2_023_126G1_scaffold_198_5
Bacillus sp. CMAA 1185, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4076..6298)
DNA (2223bp) protein (741aa)
UPI0003D5B97F related cluster n=1 Tax=unknown RepID=UPI0003D5B97F
Uncharacterized protein {ECO:0000313|EMBL:KKB93500.1}; TaxID=1385719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. CMAA 1185.;"
hypothetical protein
L2_023_126G1_scaffold_198_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6312..7373)
DNA (1062bp) protein (354aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
dcm_2; DNA (cytosine-5-)-methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Bacillus cereus H3081.97 RepID=B5V3P9_BACCE
L2_023_126G1_scaffold_198_7
Veillonella sp. DORA_B_18_19_23, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7363..8097)
DNA (735bp) protein (245aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1403933 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_B_18_19_23.;"
UPI0003D611A5 related cluster n=1 Tax=unknown RepID=UPI0003D611A5
DNA (cytosine-5-)-methyltransferase
L2_023_126G1_scaffold_198_8
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8118..8303)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C7Y0_9FIRM
Transcriptional regulator, AlpA family {ECO:0000313|EMBL:KEF36078.1}; TaxID=1348973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans MEV2011.;"
DNA binding domain, excisionase family
L2_023_126G1_scaffold_198_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8469..10277)
DNA (1809bp) protein (603aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL76_9CLOT
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EEA83205.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_023_126G1_scaffold_198_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10256..10618)
DNA (363bp) protein (121aa)
Ribbon-helix-helix protein, copG family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KT60_9FIRM
Ribbon-helix-helix protein, copG family.
Ribbon-helix-helix protein, copG family {ECO:0000313|EMBL:CBL10062.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_126G1_scaffold_198_11
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10654..11043)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AVU3_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC56334.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L2_023_126G1_scaffold_198_12
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11210..11605)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AVU2_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC56333.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L2_023_126G1_scaffold_198_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11888..12484
DNA (597bp) protein (199aa)
Predicted transcriptional regulators n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KT58_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL10060.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_126G1_scaffold_198_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12662..13912
DNA (1251bp) protein (417aa)
Site-specific recombinase XerD n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KT57_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL10059.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_126G1_scaffold_198_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14367..15080)
DNA (714bp) protein (238aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9G3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEC90601.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
XRE family transcriptional regulator
L2_023_126G1_scaffold_198_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15297..15977
DNA (681bp) protein (227aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9G4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEC90602.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_023_126G1_scaffold_198_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16002..16850
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9G5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90603.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_023_126G1_scaffold_198_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17057..17434)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C8S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23156.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_023_126G1_scaffold_198_19
Firmicutes bacterium CAG:308, Firmicutes, Bacteria

Not on your lists

comp(17452..18882)
DNA (1431bp) protein (477aa)
MobA/MobL family n=2 Tax=Firmicutes RepID=R7A0Z2_9FIRM
MobA/MobL family {ECO:0000313|EMBL:CDD51970.1}; TaxID=1263016 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:308.;"
MobA/MobL family.
L2_023_126G1_scaffold_198_20
Firmicutes bacterium CAG:308, Firmicutes, Bacteria

Not on your lists

comp(19186..19413)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:308 RepID=R7A911_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD51969.1}; TaxID=1263016 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:308.;"
hypothetical protein
L2_023_126G1_scaffold_198_21
Firmicutes bacterium CAG:308, Firmicutes, Bacteria

Not on your lists

comp(19497..19730)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:308 RepID=R6ZTY5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD51968.1}; TaxID=1263016 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:308.;"
L2_023_126G1_scaffold_198_22
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19837..20979)
DNA (1143bp) protein (381aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVY6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL21789.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_023_126G1_scaffold_198_23
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20969..21304)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVY5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL21788.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_023_126G1_scaffold_198_24
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21294..22385)
DNA (1092bp) protein (364aa)
Site-specific recombinase XerD n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVY4_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL21787.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_023_126G1_scaffold_198_25
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22385..22573)
DNA (189bp) protein (63aa)
Transcriptional regulator n=2 Tax=root RepID=K1RY90_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL21786.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_023_126G1_scaffold_198_26
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22883..23419
DNA (537bp) protein (179aa)
Helix-turn-helix n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVY2_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL21785.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_023_126G1_scaffold_198_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23645..25219)
DNA (1575bp) protein (525aa)
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
GMP synthase [glutamine-hydrolyzing] n=4 Tax=Lachnospiraceae RepID=D4KY27_9FIRM
L2_023_126G1_scaffold_198_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25542..26189
DNA (648bp) protein (216aa)
Predicted membrane protein n=3 Tax=Roseburia intestinalis RepID=D4KSW0_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL09962.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_126G1_scaffold_198_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26186..26704)
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7G559_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12265.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_126G1_scaffold_198_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27014..27268)
DNA (255bp) protein (85aa)
Sporulation transcriptional regulator SpoIIID n=2 Tax=Roseburia RepID=C7G561_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EEV03047.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
sporulation transcriptional regulator SpoIIID
Displaying items 1-30 of 108 in total

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