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L2_023_126G1_scaffold_200

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_200_1
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..603
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YBN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59645.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Retron-type reverse transcriptase
L2_023_126G1_scaffold_200_2
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(689..1768)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Z6F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86103.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
peptidase family protein
L2_023_126G1_scaffold_200_3
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1789..2994)
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86102.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
transcriptional regulator/sugar kinase
L2_023_126G1_scaffold_200_4
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3265..4545
DNA (1281bp) protein (427aa)
PTS system protein n=2 Tax=Lachnospiraceae RepID=F3AKT5_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
celB2; PTS family oligomeric beta-glucoside porter component IIC
L2_023_126G1_scaffold_200_5
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4559..6355
DNA (1797bp) protein (599aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86100.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_200_6
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6392..7285
DNA (894bp) protein (298aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2YBM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64877.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
ABC transporter permease
L2_023_126G1_scaffold_200_7
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7279..8082
DNA (804bp) protein (268aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RUU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75065.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
sugar permease
L2_023_126G1_scaffold_200_8
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8103..9551
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZLT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64879.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
extracellular solute-binding protein
L2_023_126G1_scaffold_200_9
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9733..10074
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YQ55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86096.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L2_023_126G1_scaffold_200_10
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10151..11170
DNA (1020bp) protein (340aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2Y5Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64881.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
ABC-type uncharacterized transport system, periplasmic component
L2_023_126G1_scaffold_200_11
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11198..12079
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YBL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59635.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
ABC-type uncharacterized transport system, permease component
L2_023_126G1_scaffold_200_12
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12072..12845
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YK84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86093.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ABC-type uncharacterized transport system, ATPase component
L2_023_126G1_scaffold_200_13
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12928..15192
DNA (2265bp) protein (755aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZLU1_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EPD64884.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
L2_023_126G1_scaffold_200_14
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15152..15685
DNA (534bp) protein (178aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.17.4.2 1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Lachnospiraceae RepID=E9RUT8_9FIRM
L2_023_126G1_scaffold_200_15
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15863..16378
DNA (516bp) protein (172aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
DUTP diphosphatase n=3 Tax=Lachnospiraceae RepID=S2Y5X3_9FIRM
DUTP diphosphatase {ECO:0000313|EMBL:EPD59631.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L2_023_126G1_scaffold_200_16
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16646..17398
DNA (753bp) protein (251aa)
30S ribosomal protein S2 n=4 Tax=Lachnospiraceae RepID=E9RUT6_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
SSU ribosomal protein S2P
L2_023_126G1_scaffold_200_17
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17478..18398
DNA (921bp) protein (307aa)
Elongation factor Ts n=2 Tax=Lachnospiraceae RepID=F3AKS2_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
translation elongation factor Ts (EF-Ts)
L2_023_126G1_scaffold_200_18
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18490..18750
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EHF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE01806.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
L2_023_126G1_scaffold_200_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18751..19023
DNA (273bp) protein (91aa)
Replication initiator protein A domain protein n=4 Tax=Clostridiales RepID=D5Q4L5_CLODI
Replication initiator protein A {ECO:0000313|EMBL:CCK87058.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
Replication initiator protein A (RepA) N-terminus.
L2_023_126G1_scaffold_200_20
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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19183..20040
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5ABF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX40535.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
L2_023_126G1_scaffold_200_21
unknown

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20040..20135
DNA (96bp) protein (32aa)

This feature has no annotations

L2_023_126G1_scaffold_200_22
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20113..20391
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JQB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36388.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L2_023_126G1_scaffold_200_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20614..20946)
DNA (333bp) protein (111aa)
Transposase, IS4 family protein n=1 Tax=Clostridium sp. D5 RepID=F0Z2C7_9CLOT
Transposase, IS4 family protein {ECO:0000313|EMBL:EGB91602.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Transposase DDE domain.
L2_023_126G1_scaffold_200_24
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21317..22147
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z6B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59619.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L2_023_126G1_scaffold_200_25
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22206..22853
DNA (648bp) protein (216aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YKC0_9FIRM
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EPD64923.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L2_023_126G1_scaffold_200_26
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22866..23621
DNA (756bp) protein (252aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21 3.6.3.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RUS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59617.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L2_023_126G1_scaffold_200_27
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24400..25290
DNA (891bp) protein (297aa)
Fic family protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZNW4_9FIRM
Fic family protein {ECO:0000313|EMBL:EDM88560.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L2_023_126G1_scaffold_200_28
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25329..27200
DNA (1872bp) protein (624aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZM8_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL27238.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_023_126G1_scaffold_200_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27217..27537
DNA (321bp) protein (107aa)
nucleotide pyrophosphohydrolase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DCAF65
Predicted pyrophosphatase
Predicted pyrophosphatase {ECO:0000313|EMBL:CBL27239.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_023_126G1_scaffold_200_30
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27967..28137
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IRH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24401.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
virulence-like protein
Displaying items 1-30 of 40 in total

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