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L2_023_126G1_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_219_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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14..973
DNA (960bp) protein (320aa)
Helicase C-terminal domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKE5_9CLOT
Helicase C-terminal domain protein {ECO:0000313|EMBL:EEA83504.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA methylase
L2_023_126G1_scaffold_219_2
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

987..1604
DNA (618bp) protein (206aa)
Sortase family protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C8H2_9CLOT
Sortase family protein {ECO:0000313|EMBL:EFE13809.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
LPXTG-site transpeptidase (sortase) family protein
L2_023_126G1_scaffold_219_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1597..1995
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=D4JMP6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK92250.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_023_126G1_scaffold_219_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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1999..2676
DNA (678bp) protein (226aa)
SpoVG n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKE8_9CLOT
SpoVG {ECO:0000313|EMBL:EEA83507.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Uncharacterized protein, involved in the regulation of septum location
L2_023_126G1_scaffold_219_5
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2730..3650
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C8G9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE13806.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L2_023_126G1_scaffold_219_6
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3830..4795
DNA (966bp) protein (322aa)
transcriptional regulator n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FD4225
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFE13805.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
transcriptional regulator, AraC family
L2_023_126G1_scaffold_219_7
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4937..5533
DNA (597bp) protein (199aa)
Conserved hypothetical integral membrane protein TIGR02185 n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JE88_9FIRM
conserved hypothetical integral membrane protein TIGR02185
Conserved hypothetical integral membrane protein TIGR02185 {ECO:0000313|EMBL:CBK88510.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L2_023_126G1_scaffold_219_8
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5533..6285
DNA (753bp) protein (251aa)
Cobalt transport protein n=2 Tax=Firmicutes RepID=A6BD47_9FIRM
ABC-type cobalt transport system, permease component CbiQ and related transporters
Cobalt transport protein {ECO:0000313|EMBL:EFP61890.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
L2_023_126G1_scaffold_219_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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6282..7748
DNA (1467bp) protein (489aa)
Cobalt/nickel transport system ATP-binding protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2G8_9FIRM
Cobalt/nickel transport system ATP-binding protein {ECO:0000313|EMBL:EGN48280.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L2_023_126G1_scaffold_219_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7875..9659
DNA (1785bp) protein (595aa)
Uncharacterized protein n=2 Tax=root RepID=F7K2G9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48281.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC-type multidrug transport system, ATPase and permease components
L2_023_126G1_scaffold_219_11
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9660..11408
DNA (1749bp) protein (583aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3M0_9FIRM
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL25832.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
ABC-type multidrug transport system, ATPase and permease components
L2_023_126G1_scaffold_219_12
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11420..11740
DNA (321bp) protein (107aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C8G2_9CLOT
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EFE13799.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Mn-dependent transcriptional regulator
L2_023_126G1_scaffold_219_13
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12115..12315)
DNA (201bp) protein (67aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C8F1_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFE13788.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Predicted transcriptional regulators
L2_023_126G1_scaffold_219_14
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12408..13142)
DNA (735bp) protein (245aa)
Peptidase S24-like protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C8F0_9CLOT
Peptidase S24-like protein {ECO:0000313|EMBL:EFE13787.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
LexA repressor
L2_023_126G1_scaffold_219_15
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13378..14628
DNA (1251bp) protein (417aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV n=2 Tax=Eubacterium sp. 14-2 RepID=S0JL67_9FIRM
L2_023_126G1_scaffold_219_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14792..15034
DNA (243bp) protein (81aa)
LexA DNA binding domain protein {ECO:0000313|EMBL:EEA83462.1}; EC=3.4.21.88 {ECO:0000313|EMBL:EEA83462.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
LexA DNA binding domain protein n=3 Tax=Bacteria RepID=B6FKG4_9CLOT
SOS-response transcriptional repressors (RecA-mediated autopeptidases)
L2_023_126G1_scaffold_219_17

Not on your lists

15049..15294
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=uncultured bacterium EB2 RepID=U3N9I6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGW28714.1}; TaxID=1348855 species="Bacteria; environmental samples.;" source="uncultured bacterium EB2.;"
hypothetical protein
L2_023_126G1_scaffold_219_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15471..15674
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L3B4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14104.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_126G1_scaffold_219_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15845..16192
DNA (348bp) protein (116aa)
Helix-turn-helix n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L3B5_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL14105.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_126G1_scaffold_219_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16347..16715
DNA (369bp) protein (123aa)
Site-specific recombinases, DNA invertase Pin homologs n=2 Tax=Clostridiales RepID=D4L3B6_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBK91223.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_023_126G1_scaffold_219_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16699..16869
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=D4L3B7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91224.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_023_126G1_scaffold_219_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16859..17209
DNA (351bp) protein (117aa)
Predicted transcriptional regulators n=2 Tax=Clostridiales RepID=D4L3B8_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK91225.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_023_126G1_scaffold_219_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17211..17630
DNA (420bp) protein (140aa)
Resolvase, N terminal domain n=2 Tax=Clostridiales RepID=D4L3B9_9FIRM
Resolvase, N terminal domain.
Resolvase, N terminal domain {ECO:0000313|EMBL:CBK91226.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_023_126G1_scaffold_219_24
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17627..17992
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YK56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36308.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L2_023_126G1_scaffold_219_25
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17985..18212
DNA (228bp) protein (76aa)
Excisionase from transposon Tn916 n=3 Tax=Clostridiales RepID=D4L3C0_9FIRM
Excisionase from transposon Tn916.
Excisionase from transposon Tn916 {ECO:0000313|EMBL:CDD36309.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L2_023_126G1_scaffold_219_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18294..19493
DNA (1200bp) protein (400aa)
Site-specific recombinase XerD n=2 Tax=Clostridiales RepID=D4L3C1_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL14111.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_126G1_scaffold_219_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19726..20238
DNA (513bp) protein (171aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AV52_9FIRM
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDA54905.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_126G1_scaffold_219_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20641..26211
DNA (5571bp) protein (1857aa)
Glycosidases n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSB4_9FIRM
Glycosidases {ECO:0000313|EMBL:CBL09766.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Glycosidases
L2_023_126G1_scaffold_219_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26713..28044
DNA (1332bp) protein (444aa)
aspartyl-tRNA synthetase, archaeal type (EC:6.1.1.23)
Aspartate--tRNA ligase n=2 Tax=Roseburia RepID=C7GFQ3_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDA54902.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_126G1_scaffold_219_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28115..29029
DNA (915bp) protein (305aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AV46_9FIRM
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000313|EMBL:CDA54900.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
glutamyl-tRNA(Gln) amidotransferase subunit C
Displaying items 1-30 of 83 in total

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