ggKbase home page

L2_023_126G1_scaffold_235

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_235_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..942
DNA (942bp) protein (314aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6R4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDQ97676.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
cbiO5; cobalt ABC transport system ATP-binding protein CbiO5
L2_023_126G1_scaffold_235_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

900..1628
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X6P1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI93043.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L2_023_126G1_scaffold_235_3
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1716..2450
DNA (735bp) protein (245aa)
Sortase SrtB family n=2 Tax=Clostridium bartlettii CAG:1329 RepID=R5XDK7_9CLOT
Sortase SrtB family {ECO:0000313|EMBL:CDA10469.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
peptidase C60B
L2_023_126G1_scaffold_235_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2582..3418)
DNA (837bp) protein (279aa)
Bacterial group 2 Ig-like protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6R7_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:EDQ97679.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Bacterial Ig-like domain (group 2).
L2_023_126G1_scaffold_235_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3661..4830
DNA (1170bp) protein (390aa)
UPI0003D6861A related cluster n=1 Tax=unknown RepID=UPI0003D6861A
Uncharacterized protein {ECO:0000313|EMBL:ETI94365.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
PucR family transcriptional regulator
L2_023_126G1_scaffold_235_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4972..6246
DNA (1275bp) protein (425aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6R9_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDQ97681.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
transporter
L2_023_126G1_scaffold_235_7
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6473..7828
DNA (1356bp) protein (452aa)
Efflux ABC transporter, permease protein n=2 Tax=Clostridiales RepID=B0A6S0_9FIRM
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDA10465.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ABC transporter permease
L2_023_126G1_scaffold_235_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7840..8466
DNA (627bp) protein (209aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0A6S1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI94362.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ABC transporter ATP-binding protein
L2_023_126G1_scaffold_235_9
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8570..9304)
DNA (735bp) protein (245aa)
Protein TraX n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6S2_9FIRM
Protein TraX {ECO:0000313|EMBL:EDQ97684.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_023_126G1_scaffold_235_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9634..10182
DNA (549bp) protein (183aa)
Nitroreductase family protein n=2 Tax=Clostridiales RepID=B0A6S3_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:CDA10462.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
dihydropteridine reductase
L2_023_126G1_scaffold_235_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10248..11072
DNA (825bp) protein (275aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6S4_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDQ97686.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
nitroreductase family protein
L2_023_126G1_scaffold_235_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11382..12074)
DNA (693bp) protein (231aa)
Putative sporulation protein YtaF n=2 Tax=Clostridiales RepID=B0A6S5_9FIRM
Putative sporulation protein YtaF {ECO:0000313|EMBL:EDQ97687.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_023_126G1_scaffold_235_13
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12216..13097
DNA (882bp) protein (294aa)
Ion channel n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XDJ8_9CLOT
Ion channel {ECO:0000313|EMBL:CDA10459.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Ion channel family
L2_023_126G1_scaffold_235_14
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13291..14013
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X457_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10458.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_023_126G1_scaffold_235_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14028..14435
DNA (408bp) protein (136aa)
Cupin domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6S8_9FIRM
Cupin domain protein {ECO:0000313|EMBL:EDQ97690.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
4-carboxymuconolactone decarboxylase
L2_023_126G1_scaffold_235_16
unknown

Not on your lists

14444..14662
DNA (219bp) protein (73aa)

This feature has no annotations

L2_023_126G1_scaffold_235_17
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14720..15037
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5XNT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10456.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_023_126G1_scaffold_235_18
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15015..15344)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A6T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA10455.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
5'-nucleotidase
L2_023_126G1_scaffold_235_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15514..16155
DNA (642bp) protein (214aa)
Antioxidant, AhpC/TSA family n=2 Tax=Clostridiales RepID=B0A6T1_9FIRM
Antioxidant AhpC/TSA family {ECO:0000313|EMBL:CDA10454.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
putative thioredoxin
L2_023_126G1_scaffold_235_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16148..16297
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A6T2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA10453.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_023_126G1_scaffold_235_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16279..17223
DNA (945bp) protein (315aa)
4Fe-4S binding domain protein n=3 Tax=Clostridiales RepID=B0A6T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI94353.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
iron-sulfur cluster-binding protein
L2_023_126G1_scaffold_235_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17316..17999
DNA (684bp) protein (228aa)
Response regulator receiver domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI94352.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
two-component DNA-binding response regulator
L2_023_126G1_scaffold_235_23
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17999..19459
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridiales RepID=B0A6T5_9FIRM
hypothetical protein
L2_023_126G1_scaffold_235_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19772..21121
DNA (1350bp) protein (450aa)
Putative permease n=2 Tax=Clostridiales RepID=R5XDI8_9CLOT
Putative permease {ECO:0000313|EMBL:CDA10449.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
xanthine permease
L2_023_126G1_scaffold_235_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21235..22203
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97699.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
conserved hypothetical protein
L2_023_126G1_scaffold_235_26
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22526..24268)
DNA (1743bp) protein (581aa)
ABC transporter related n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y1A6_9CLOT
ABC transporter related {ECO:0000313|EMBL:CDA10447.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ABC transporter
L2_023_126G1_scaffold_235_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24433..25419
DNA (987bp) protein (329aa)
cbh; Choloylglycine hydrolase (EC:3.5.1.24)
Choloylglycine hydrolase n=2 Tax=Clostridiales RepID=B0A6U0_9FIRM
Choloylglycine hydrolase {ECO:0000313|EMBL:CDA10446.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_023_126G1_scaffold_235_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25682..26692
DNA (1011bp) protein (337aa)
dacF3; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6U1_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDQ97703.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L2_023_126G1_scaffold_235_29

Not on your lists

comp(26765..27685)
DNA (921bp) protein (307aa)
AraC family transcriptional regulator n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G020_CLOPA
Helix-turn-helix-domain containing protein, AraC type {ECO:0000313|EMBL:ETJ17926.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
helix-turn-helix domain-containing protein
L2_023_126G1_scaffold_235_30

Not on your lists

27869..28837
DNA (969bp) protein (323aa)
Permease DMT family n=1 Tax=Clostridium sp. CAG:221 RepID=R6FQW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17927.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
protein of unknown function DUF6 transmembrane
Displaying items 1-30 of 35 in total

View Taxonomy