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L2_023_126G1_scaffold_286

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_286_1
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(85..270)
DNA (186bp) protein (62aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6BD62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA57011.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_023_126G1_scaffold_286_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(292..930)
DNA (639bp) protein (213aa)
Transcriptional regulator n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVV6_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL11496.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_126G1_scaffold_286_3
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1168..2991)
DNA (1824bp) protein (608aa)
Recombinase-like protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P4B1_9FIRM
Recombinase-like protein {ECO:0000313|EMBL:CCZ03927.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_023_126G1_scaffold_286_4
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3166..3534)
DNA (369bp) protein (123aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
mRNA interferase n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NUM2_9FIRM
Growth inhibitor
L2_023_126G1_scaffold_286_5
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4102..4566)
DNA (465bp) protein (155aa)
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P8C4_9FIRM
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog {ECO:0000313|EMBL:CCZ05267.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L2_023_126G1_scaffold_286_6
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5023..5979)
DNA (957bp) protein (319aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P658_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CCZ05266.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
serine-type D-Ala-D-Ala carboxypeptidase
L2_023_126G1_scaffold_286_7
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6027..6521)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NM49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ05265.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L2_023_126G1_scaffold_286_8
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6549..7745)
DNA (1197bp) protein (399aa)
Efflux ABC transporter permease protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NSY8_9FIRM
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CCZ05264.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L2_023_126G1_scaffold_286_9
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7726..8490)
DNA (765bp) protein (255aa)
ABC-type transport system involved in lipoprotein release ATPase component n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NN42_9FIRM
ABC-type transport system involved in lipoprotein release ATPase component {ECO:0000313|EMBL:CCZ05263.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_023_126G1_scaffold_286_10
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8441..9304)
DNA (864bp) protein (288aa)
Conserved domain protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P8C0_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CCZ05262.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L2_023_126G1_scaffold_286_11
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9454..10542)
DNA (1089bp) protein (363aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS20_9FIRM
Signal transduction histidine kinase
L2_023_126G1_scaffold_286_12
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10529..11227)
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NM44_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ05260.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
DNA-binding response regulator
L2_023_126G1_scaffold_286_13
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11276..11452)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NSY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ05259.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
putative transposase
L2_023_126G1_scaffold_286_14
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11641..12000
DNA (360bp) protein (120aa)
Helix-turn-helix n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NN38_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CCZ05258.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
Helix-turn-helix.
L2_023_126G1_scaffold_286_15
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12029..13735)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P8B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ05257.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
antigen-like protein
L2_023_126G1_scaffold_286_16
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13771..14541)
DNA (771bp) protein (257aa)
Sortase B-like protein n=2 Tax=Firmicutes RepID=C4P4H2_ENTFL
Sortase B-like protein {ECO:0000313|EMBL:CCZ05256.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
srtB; Sortase B
L2_023_126G1_scaffold_286_17
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14556..14960)
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R5NM37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ05255.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L2_023_126G1_scaffold_286_18
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15044..16504)
DNA (1461bp) protein (487aa)
ATPase n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NSY0_9FIRM
ATPase {ECO:0000313|EMBL:CCZ05254.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
ATPase (AAA+ superfamily)
L2_023_126G1_scaffold_286_19
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16669..19002)
DNA (2334bp) protein (778aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NUN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF93008.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
TRSE protein
L2_023_126G1_scaffold_286_20
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18986..19438)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Enterococcus faecalis RepID=C4P4G8_ENTFL
Putative uncharacterized protein {ECO:0000313|EMBL:ACQ89851.1}; TaxID=1351 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis (Streptococcus faecalis).;"
conserved hypothetical protein
L2_023_126G1_scaffold_286_21
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19454..20290)
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R5P647_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ05251.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L2_023_126G1_scaffold_286_22
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20386..20748)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NUN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF93011.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
hypothetical protein
L2_023_126G1_scaffold_286_23
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20762..22447)
DNA (1686bp) protein (562aa)
TraG-like protein n=1 Tax=Enterococcus faecalis RepID=C4P4G5_ENTFL
TraG-like protein {ECO:0000313|EMBL:ACQ89848.1}; TaxID=1351 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis (Streptococcus faecalis).;"
Type IV secretory pathway, VirD4 components
L2_023_126G1_scaffold_286_24
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22542..22739)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Enterococcus faecalis RepID=C4P4G4_ENTFL
Putative uncharacterized protein {ECO:0000313|EMBL:ACQ89847.1}; TaxID=1351 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis (Streptococcus faecalis).;"
hypothetical protein
L2_023_126G1_scaffold_286_25
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22755..23618)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P8A4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ05247.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L2_023_126G1_scaffold_286_26
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23624..24436)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P645_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ05246.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
conserved hypothetical protein
L2_023_126G1_scaffold_286_27
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24378..25790)
DNA (1413bp) protein (471aa)
Relaxase n=1 Tax=Enterococcus faecalis RepID=C4P4G1_ENTFL
Relaxase {ECO:0000313|EMBL:ACQ89844.1}; TaxID=1351 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis (Streptococcus faecalis).;"
Relaxase/Mobilisation nuclease domain.
L2_023_126G1_scaffold_286_28
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25790..26122)
DNA (333bp) protein (111aa)
MocB-like protein n=1 Tax=Enterococcus faecalis RepID=C4P4G0_ENTFL
MocB-like protein {ECO:0000313|EMBL:ACQ89842.1}; TaxID=1351 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis (Streptococcus faecalis).;"
relaxosome protein
L2_023_126G1_scaffold_286_29
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26082..26234)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NN24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ05243.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein predicted by Glimmer/Critica
L2_023_126G1_scaffold_286_30
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26325..26621)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Enterococcus faecalis RepID=C4P4F9_ENTFL
Putative uncharacterized protein {ECO:0000313|EMBL:ACQ89841.1}; TaxID=1351 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis (Streptococcus faecalis).;"
hypothetical protein predicted by Glimmer/Critica
Displaying 30 items

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