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L2_023_126G1_scaffold_305

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_305_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1168
DNA (1167bp) protein (389aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Klebsiella sp. 1_1_55 RepID=D6GMQ2_9ENTR
carbamoyl phosphate synthase small subunit
L2_023_126G1_scaffold_305_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1187..4411
DNA (3225bp) protein (1075aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
carbamoyl phosphate synthase large subunit n=1 Tax=Salmonella choleraesuis RepID=UPI0003BACA29
L2_023_126G1_scaffold_305_3
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4662..5051
DNA (390bp) protein (130aa)
Transcriptional activator n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TGM1_CITRI
Uncharacterized protein {ECO:0000313|EMBL:KDF12891.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
caiF; transcriptional activator
L2_023_126G1_scaffold_305_4
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5096..5692)
DNA (597bp) protein (199aa)
Carnitine operon protein CaiE n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=CAIE_CITK8
Carnitine operon protein CaiE {ECO:0000256|HAMAP-Rule:MF_01525}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
carnitine operon protein CaiE
L2_023_126G1_scaffold_305_5
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5742..6527)
DNA (786bp) protein (262aa)
Carnitinyl-CoA dehydratase {ECO:0000256|HAMAP-Rule:MF_01051}; EC=4.2.1.149 {ECO:0000256|HAMAP-Rule:MF_01051};; Crotonobetainyl-CoA hydratase {ECO:0000256|HAMAP-Rule:MF_01051}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Carnitinyl-CoA dehydratase n=1 Tax=Escherichia coli KTE75 RepID=L3QH58_ECOLX
caiD; Crotonobetainyl CoA hydratase
L2_023_126G1_scaffold_305_6
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6580..8133)
DNA (1554bp) protein (518aa)
Probable crotonobetaine/carnitine-CoA ligase {ECO:0000256|HAMAP-Rule:MF_01524}; EC=6.2.1.- {ECO:0000256|HAMAP-Rule:MF_01524};; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Probable crotonobetaine/carnitine-CoA ligase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=CAIC_CITK8
caiC; putative crotonobetaine/carnitine-CoA ligase
L2_023_126G1_scaffold_305_7
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8196..9413)
DNA (1218bp) protein (406aa)
L-carnitine CoA-transferase {ECO:0000256|HAMAP-Rule:MF_01050}; EC=2.8.3.21 {ECO:0000256|HAMAP-Rule:MF_01050};; Crotonobetainyl-CoA:carnitine CoA-transferase {ECO:0000256|HAMAP-Rule:MF_01050}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Crotonobetainyl-CoA:carnitine CoA-transferase n=1 Tax=Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 RepID=V1VIV9_SALET
caiB; crotonobetainyl-CoA:carnitine CoA-transferase
L2_023_126G1_scaffold_305_8
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9498..10640)
DNA (1143bp) protein (381aa)
Crotonobetainyl-CoA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01052}; EC=1.3.99.- {ECO:0000256|HAMAP-Rule:MF_01052};; Crotonobetainyl-CoA reductase {ECO:0000256|HAMAP-Rule:MF_01052}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Crotonobetainyl-CoA dehydrogenase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=CAIA_CITK8
crotonobetainyl-CoA dehydrogenase
L2_023_126G1_scaffold_305_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10673..12190)
DNA (1518bp) protein (506aa)
L-carnitine/gamma-butyrobetaine antiporter n=6 Tax=Citrobacter RepID=J1G2S2_9ENTR
L-carnitine/gamma-butyrobetaine antiporter {ECO:0000256|HAMAP-Rule:MF_01049}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
L-carnitine/gamma-butyrobetaine antiporter
L2_023_126G1_scaffold_305_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12669..13442
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ALR1_CITK8
Protein FixA {ECO:0000256|HAMAP-Rule:MF_01055}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
putative electron transfer flavoprotein FixA
L2_023_126G1_scaffold_305_11
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13455..14396
DNA (942bp) protein (314aa)
Electron transfer flavoprotein FixB n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CFA9_CITFR
Protein FixB {ECO:0000256|HAMAP-Rule:MF_01056}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
fixB; FixB protein
L2_023_126G1_scaffold_305_12
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14419..15705
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ALQ9_CITK8
Oxidoreductase {ECO:0000313|EMBL:KEY45938.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
putative oxidoreductase FixC
L2_023_126G1_scaffold_305_13
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15702..15989
DNA (288bp) protein (96aa)
Ferredoxin-like protein FixX n=2 Tax=Salmonella enterica I RepID=G5PHV7_SALET
Ferredoxin-like protein fixX {ECO:0000313|EMBL:KDF12881.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
fixX; ferredoxin like protein FixX
L2_023_126G1_scaffold_305_14
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16128..17459
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ALQ7_CITK8
Metabolite transporter {ECO:0000313|EMBL:KEY45940.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L2_023_126G1_scaffold_305_15
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17562..17795
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ALQ6_CITK8
Uncharacterized protein {ECO:0000313|EMBL:KDF12879.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
hypothetical protein
L2_023_126G1_scaffold_305_16
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17899..18429
DNA (531bp) protein (177aa)
Glutathione-regulated potassium-efflux system ancillary protein KefF n=6 Tax=Citrobacter RepID=J1G2K0_9ENTR
Glutathione-regulated potassium-efflux system ancillary protein KefF {ECO:0000256|HAMAP-Rule:MF_01414}; Quinone oxidoreductase KefF {ECO:0000256|HAMAP-Rule:MF_01414}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
potassium transporter KefF
L2_023_126G1_scaffold_305_17
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18422..20284
DNA (1863bp) protein (621aa)
Glutathione-regulated potassium-efflux system protein KefC n=1 Tax=Shigella flexneri 1235-66 RepID=I6HAS3_SHIFL
Glutathione-regulated potassium-efflux system protein KefC {ECO:0000256|HAMAP-Rule:MF_01413}; K(+)/H(+) antiporter {ECO:0000256|HAMAP-Rule:MF_01413}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
potassium transporter KefC
L2_023_126G1_scaffold_305_18
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20482..20961
DNA (480bp) protein (160aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Dihydrofolate reductase n=536 Tax=Salmonella enterica I RepID=A9MYM1_SALPB
folA; dihydrofolate reductase
L2_023_126G1_scaffold_305_19
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21054..21902)
DNA (849bp) protein (283aa)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000256|HAMAP-Rule:MF_00199, ECO:0000256|SAAS:SAAS00088338}; EC=3.6.1.41 {ECO:0000256|HAMAP-Rule:MF_00199, ECO:0000256|SAAS:SAAS00088330};; Ap4A hydrolase {ECO:0000256|HAMAP-Rule:MF_00199}; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00199}; Diadenosine tetraphosphatase {ECO:0000256|HAMAP-Rule:MF_00199}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BF42_9ENTR
apaH; diadenosine tetraphosphatase
L2_023_126G1_scaffold_305_20
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21913..22290)
DNA (378bp) protein (126aa)
Protein ApaG n=11 Tax=Citrobacter RepID=C1MCG0_9ENTR
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
apaG; hypothetical protein
L2_023_126G1_scaffold_305_21
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22293..23114)
DNA (822bp) protein (274aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Bacteria RepID=RSMA_CITK8
ksgA; dimethyladenosine transferase
L2_023_126G1_scaffold_305_22
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23111..24100)
DNA (990bp) protein (330aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Citrobacter sp. 30_2 RepID=C1MCG2_9ENTR
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase
L2_023_126G1_scaffold_305_23
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24100..25386)
DNA (1287bp) protein (429aa)
Chaperone SurA n=1 Tax=Shigella flexneri 1235-66 RepID=I6HAS9_SHIFL
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Flags: Precursor;; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
peptidyl-prolyl cis-trans isomerase SurA
Displaying 23 items

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