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L2_023_126G1_scaffold_307

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_307_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(554..2176)
DNA (1623bp) protein (541aa)
Beta-xylosidase {ECO:0000313|EMBL:CBL10126.1}; EC=3.2.1.37 {ECO:0000313|EMBL:CBL10126.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Beta-xylosidase (EC:3.2.1.37)
Beta-xylosidase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTC4_9FIRM
L2_023_126G1_scaffold_307_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3242..3442
DNA (201bp) protein (67aa)
Aldo/keto reductases, related to diketogulonate reductase n=3 Tax=Roseburia intestinalis RepID=D4KTC6_9FIRM
Aldo/keto reductases, related to diketogulonate reductase
Aldo/keto reductases, related to diketogulonate reductase {ECO:0000313|EMBL:CBL10128.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_126G1_scaffold_307_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3539..4735)
DNA (1197bp) protein (399aa)
Beta-lactamase class C and other penicillin binding proteins n=3 Tax=Roseburia intestinalis RepID=D4KTC7_9FIRM
Beta-lactamase class C and other penicillin binding proteins
Beta-lactamase class C and other penicillin binding proteins {ECO:0000313|EMBL:CBL10129.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_126G1_scaffold_307_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4822..5985)
DNA (1164bp) protein (388aa)
Beta-lactamase class C and other penicillin binding proteins n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L166_9FIRM
Beta-lactamase class C and other penicillin binding proteins
Beta-lactamase class C and other penicillin binding proteins {ECO:0000313|EMBL:CBL13356.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_126G1_scaffold_307_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6083..7537)
DNA (1455bp) protein (485aa)
Putative efflux protein, MATE family n=2 Tax=Roseburia intestinalis RepID=D4KTC9_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL10131.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_126G1_scaffold_307_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7840..9546
DNA (1707bp) protein (569aa)
Poly(3-hydroxybutyrate) depolymerase n=3 Tax=Roseburia intestinalis RepID=D4KTD0_9FIRM
Poly(3-hydroxybutyrate) depolymerase
Poly(3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:CBL10132.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_126G1_scaffold_307_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9646..10566
DNA (921bp) protein (307aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=3 Tax=Roseburia intestinalis RepID=D4KTD1_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL10133.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_126G1_scaffold_307_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10587..11507
DNA (921bp) protein (307aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=3 Tax=Roseburia intestinalis RepID=D4KTD2_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL10134.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_126G1_scaffold_307_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11576..13345
DNA (1770bp) protein (590aa)
ABC transporter, solute-binding protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G906_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEV01699.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_023_126G1_scaffold_307_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13529..14587
DNA (1059bp) protein (353aa)
Transcriptional regulators n=3 Tax=Roseburia intestinalis RepID=D4L174_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL10137.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_126G1_scaffold_307_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14696..17008
DNA (2313bp) protein (771aa)
Isoamylase N-terminal domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G908_9FIRM
Isoamylase N-terminal domain protein {ECO:0000313|EMBL:EEV01701.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Enterochelin esterase and related enzymes
L2_023_126G1_scaffold_307_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17064..18671
DNA (1608bp) protein (536aa)
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:CBL10139.1}; EC=3.2.1.55 {ECO:0000313|EMBL:CBL10139.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Alpha-L-arabinofuranosidase (EC:3.2.1.55)
Alpha-L-arabinofuranosidase n=4 Tax=Roseburia intestinalis RepID=D4KTD7_9FIRM
L2_023_126G1_scaffold_307_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18687..19481
DNA (795bp) protein (265aa)
Putative esterase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G911_9FIRM
Putative esterase {ECO:0000313|EMBL:EEV01662.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted esterase
L2_023_126G1_scaffold_307_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19483..20259
DNA (777bp) protein (259aa)
Predicted esterase n=3 Tax=Roseburia intestinalis RepID=D4L178_9FIRM
Predicted esterase
Predicted esterase {ECO:0000313|EMBL:CBL10141.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_126G1_scaffold_307_15
unknown

Not on your lists

20202..20315
DNA (114bp) protein (38aa)

This feature has no annotations

L2_023_126G1_scaffold_307_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20348..21757
DNA (1410bp) protein (470aa)
MATE efflux family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G913_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEV01664.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
putative efflux protein, MATE family
L2_023_126G1_scaffold_307_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21754..21909
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G914_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01665.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_126G1_scaffold_307_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21869..23830
DNA (1962bp) protein (654aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7G915_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL13370.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
hypothetical protein
L2_023_126G1_scaffold_307_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23868..25289
DNA (1422bp) protein (474aa)
Alpha-L-arabinofuranosidase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTE2_9FIRM
Alpha-L-arabinofuranosidase
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:EEV01667.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_126G1_scaffold_307_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25408..27687
DNA (2280bp) protein (760aa)
Alpha-L-arabinofuranosidase n=2 Tax=Roseburia intestinalis RepID=D4L181_9FIRM
Alpha-L-arabinofuranosidase
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:CBL13371.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_126G1_scaffold_307_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27890..28978
DNA (1089bp) protein (363aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G918_9FIRM
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EEV01669.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Beta-glucosidase-related glycosidases
L2_023_126G1_scaffold_307_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29170..29724
DNA (555bp) protein (185aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G920_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEV01671.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_023_126G1_scaffold_307_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29906..31201)
DNA (1296bp) protein (432aa)
Site-specific recombinase XerD n=6 Tax=Firmicutes RepID=D4JN76_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK92430.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_023_126G1_scaffold_307_24
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31288..31917)
DNA (630bp) protein (210aa)
Helix-turn-helix n=11 Tax=Clostridiales RepID=D4JN77_9FIRM
Helix-turn-helix.
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58849.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
L2_023_126G1_scaffold_307_25
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32092..32322
DNA (231bp) protein (77aa)
DNA binding domain, excisionase family n=4 Tax=Clostridiales RepID=D4JN78_9FIRM
DNA binding domain, excisionase family
Uncharacterized protein {ECO:0000313|EMBL:AEN97626.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_023_126G1_scaffold_307_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32481..32900
DNA (420bp) protein (140aa)
Relaxasome subunit MobC n=3 Tax=Clostridiales RepID=D4JN79_9FIRM
relaxasome subunit MobC
Relaxasome subunit MobC {ECO:0000313|EMBL:CBK92433.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_023_126G1_scaffold_307_27
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32900..33205
DNA (306bp) protein (102aa)
Uncharacterized protein n=6 Tax=Clostridiales RepID=C0EUU9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97624.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_023_126G1_scaffold_307_28
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33181..34902
DNA (1722bp) protein (574aa)
Putative conjugal transfer protein n=2 Tax=Clostridiales RepID=G2SY35_ROSHA
Putative conjugal transfer protein {ECO:0000313|EMBL:AEN97623.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
putative conjugal transfer protein
L2_023_126G1_scaffold_307_29
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34841..35590
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RDD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK51573.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_023_126G1_scaffold_307_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35922..36695
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98982.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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