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L2_023_126G1_scaffold_315

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_315_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10..1116
DNA (1107bp) protein (369aa)
UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase (EC:2.4.1.-)
Lipopolysaccharide 1,6-galactosyltransferase n=7 Tax=Salmonella enterica I RepID=B4TZX0_SALSV
UDP-D-galactose:(Glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase {ECO:0000313|EMBL:KEY45854.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
L2_023_126G1_scaffold_315_2
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1122..2135
DNA (1014bp) protein (338aa)
Lipopolysaccharide alpha-1,3-glucosyltransferase WaaO n=2 Tax=Salmonella senftenberg RepID=G5R7B3_SALSE
Lipopolysaccharide 1,3-galactosyltransferase {ECO:0000313|EMBL:KDF11880.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
lipopolysaccharide 1,3-galactosyltransferase
L2_023_126G1_scaffold_315_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2156..3172
DNA (1017bp) protein (339aa)
Lipopolysaccharide alpha-1,3-glucosyltransferase WaaO n=2 Tax=Salmonella enterica I RepID=G5LVG2_SALET
Lipopolysaccharide 1,2-glucosyltransferase {ECO:0000313|EMBL:KEY45852.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L2_023_126G1_scaffold_315_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3186..3884
DNA (699bp) protein (233aa)
lipopolysaccharide core heptose(II) kinase RfaY n=1 Tax=Salmonella choleraesuis RepID=UPI0002BC3BC7
Heptose kinase {ECO:0000313|EMBL:KEY45851.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
lipopolysaccharide core biosynthesis protein
L2_023_126G1_scaffold_315_5
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4065..4919
DNA (855bp) protein (285aa)
Lipopolysaccharide core biosynthesis protein n=12 Tax=Escherichia coli RepID=I2I5R1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KDF11877.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
rfaZ; lipopolysaccharide core biosynthesis protein
L2_023_126G1_scaffold_315_6
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4957..6033
DNA (1077bp) protein (359aa)
Lipopolysaccharide 1,2-N-acetylglucosaminetransferase n=1 Tax=Escherichia sp. TW11588 RepID=UPI0002BB555C
Uncharacterized protein {ECO:0000313|EMBL:KDF11876.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
lipopolysaccharide core biosynthesis protein
L2_023_126G1_scaffold_315_7
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6060..7331)
DNA (1272bp) protein (424aa)
O-antigen Polymerase n=3 Tax=Escherichia coli RepID=E9YW30_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KDF11875.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
lipopolysaccharide core biosynthesis protein
L2_023_126G1_scaffold_315_8
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7342..8304)
DNA (963bp) protein (321aa)
rfaC; lipopolysaccharide heptosyltransferase 1 (EC:2.-.-.-)
Lipopolysaccharide heptosyltransferase 1 n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIY2_CITRI
Lipopolysaccharide heptosyltransferase 1 {ECO:0000313|EMBL:KDF11874.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
L2_023_126G1_scaffold_315_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8308..9354)
DNA (1047bp) protein (349aa)
ADP-heptose:LPS heptosyltransferase II n=2 Tax=Enterobacter RepID=K4YBH2_9ENTR
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:KEY45846.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
ADP-heptose--LPS heptosyltransferase
L2_023_126G1_scaffold_315_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9367..10299)
DNA (933bp) protein (311aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055236};; ADP-L-glycero-beta-D-manno-heptose-6-epimerase {ECO:0000256|HAMAP-Rule:MF_01601}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=HLDD_CITK8
rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase
L2_023_126G1_scaffold_315_11
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10515..11711
DNA (1197bp) protein (399aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
kbl; 2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIY5_CITRI
L2_023_126G1_scaffold_315_12
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11721..12746
DNA (1026bp) protein (342aa)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
tdh; L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase n=2 Tax=Salmonella infantis RepID=V8MAA7_SALIN
L2_023_126G1_scaffold_315_13
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12983..14017
DNA (1035bp) protein (345aa)
Glycosyltransferase, group 2 family protein n=7 Tax=Escherichia coli RepID=E9UAX7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KDF11869.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
yibD; putative glycosyl transferase
L2_023_126G1_scaffold_315_14
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14004..14963)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Salmonella choleraesuis RepID=UPI0002B9BC2A
Uncharacterized protein {ECO:0000313|EMBL:KDF11868.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Putative periplasmic protein YibQ -like protein with nucleoside di phosphatase and polysaccharide deacetylase
L2_023_126G1_scaffold_315_15
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14967..16214)
DNA (1248bp) protein (416aa)
Putative peptidase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIY9_CITRI
Uncharacterized protein {ECO:0000313|EMBL:KDF11867.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
peptidase
L2_023_126G1_scaffold_315_16
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16260..17804)
DNA (1545bp) protein (515aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=3 Tax=Citrobacter RepID=K8QRS7_CITFR
phosphoglyceromutase
L2_023_126G1_scaffold_315_17
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18052..18483
DNA (432bp) protein (144aa)
Putative rhodanase-like exported protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIZ1_CITRI
Uncharacterized protein {ECO:0000313|EMBL:KEY45838.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
rhodanase-like protein
L2_023_126G1_scaffold_315_18
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18516..18767
DNA (252bp) protein (84aa)
Glutaredoxin 3 n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIZ2_CITRI
grxC; glutaredoxin
Glutaredoxin 3 {ECO:0000313|EMBL:CBG90904.1}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
L2_023_126G1_scaffold_315_19
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18830..19297
DNA (468bp) protein (156aa)
Protein-export protein SecB n=13 Tax=Enterobacteriaceae RepID=SECB_CITK8
preprotein translocase subunit SecB
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_023_126G1_scaffold_315_20
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19297..20316
DNA (1020bp) protein (340aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=2 Tax=Citrobacter RepID=M3DSF6_CITFR
glycerol-3-phosphate dehydrogenase
L2_023_126G1_scaffold_315_21
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20396..21217
DNA (822bp) protein (274aa)
Serine acetyltransferase {ECO:0000313|EMBL:KEY45834.1}; EC=2.3.1.30 {ECO:0000313|EMBL:KEY45834.1};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase n=10 Tax=Enterobacter cloacae complex RepID=D6DP80_ENTCL
L2_023_126G1_scaffold_315_22
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21296..21772)
DNA (477bp) protein (159aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Enterobacter hormaechei ATCC 49162 RepID=F5RR26_9ENTR
rRNA methylase
L2_023_126G1_scaffold_315_23
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21812..22999)
DNA (1188bp) protein (396aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01559, ECO:0000256|SAAS:SAAS00019080}; EC=1.1.-.- {ECO:0000256|HAMAP-Rule:MF_01559, ECO:0000256|SAAS:SAAS00019079};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
lldD; lactate dehydrogenase (EC:1.1.2.3)
L-lactate dehydrogenase [cytochrome] n=3 Tax=Enterobacter cloacae complex RepID=F5RR24_9ENTR
L2_023_126G1_scaffold_315_24
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22996..23772)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ARJ0_CITK8
Transcriptional regulator {ECO:0000313|EMBL:KEY45831.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
DNA-binding transcriptional repressor LldR
L2_023_126G1_scaffold_315_25
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23769..24926)
DNA (1158bp) protein (386aa)
L-lactate permease n=3 Tax=Escherichia fergusonii RepID=B7LTL0_ESCF3
L-lactate permease {ECO:0000313|EMBL:KDF11857.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
lldP; L-lactate permease
Displaying 25 items

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