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L2_023_126G1_scaffold_338

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_338_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..384)
DNA (384bp) protein (128aa)
gltA; putative oxidoreductase (EC:1.4.1.13)
Glutamate synthase (NADPH), homotetrameric n=3 Tax=Clostridium butyricum DKU-01 RepID=M8J7L7_CLOBU
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:ENZ35702.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_023_126G1_scaffold_338_2
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(387..1277)
DNA (891bp) protein (297aa)
Glutamate synthase NADPH large chain {ECO:0000313|EMBL:KJZ87248.1}; EC=1.4.1.13 {ECO:0000313|EMBL:KJZ87248.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Oxidoreductase FAD/NAD n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBH1_CLOBU
ferredoxin-NADP(+) reductase subunit alpha
L2_023_126G1_scaffold_338_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1429..2505)
DNA (1077bp) protein (359aa)
Sorbitol dehydrogenase n=3 Tax=Clostridium butyricum RepID=B1QWU3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83601.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
alcohol dehydrogenase
L2_023_126G1_scaffold_338_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2747..4735)
DNA (1989bp) protein (663aa)
UPI0003D65D1C related cluster n=1 Tax=unknown RepID=UPI0003D65D1C
Uncharacterized protein {ECO:0000313|EMBL:KJZ83215.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Fis family GAF modulated sigma54 specific transcriptional regulator
L2_023_126G1_scaffold_338_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5231..6985)
DNA (1755bp) protein (585aa)
Methyl-accepting chemotaxis sensory transducer n=2 Tax=Clostridium butyricum RepID=B1QWU5_CLOBU
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EEP54936.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
methyl-accepting chemotaxis sensory transducer
L2_023_126G1_scaffold_338_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8242..9018)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JC65_CLOBU
Mobile element protein {ECO:0000313|EMBL:KJZ87713.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transposase
L2_023_126G1_scaffold_338_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9408..9593)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KG44_CLOBU
Mobile element protein {ECO:0000313|EMBL:KJZ85397.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transposase
L2_023_126G1_scaffold_338_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9695..10045)
DNA (351bp) protein (117aa)
IS66 Orf2 like protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7X3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30341.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_023_126G1_scaffold_338_9
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10038..10349)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLB3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89453.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L2_023_126G1_scaffold_338_10
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(10601..12382)
DNA (1782bp) protein (594aa)
Divergent AAA domain protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QTK8_9CYAN
Divergent AAA domain protein {ECO:0000313|EMBL:ERT09766.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
hypothetical protein
L2_023_126G1_scaffold_338_11
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12526..13641)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X3M0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KEI12535.1}; TaxID=1443122 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi B str. NCTC 9691.;"
hypothetical protein
L2_023_126G1_scaffold_338_12
unknown

Not on your lists

comp(13857..13988)
DNA (132bp) protein (44aa)

This feature has no annotations

L2_023_126G1_scaffold_338_13
unknown

Not on your lists

comp(14039..14239)
DNA (201bp) protein (67aa)

This feature has no annotations

L2_023_126G1_scaffold_338_14
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14599..15753)
DNA (1155bp) protein (385aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FSY6_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA08683.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
L2_023_126G1_scaffold_338_15
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15757..17382)
DNA (1626bp) protein (542aa)
Type I restriction-modification system, DNA-methyltransferase subunit M {ECO:0000313|EMBL:EIA08684.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EIA08684.1};; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
Type I restriction-modification system, DNA-methyltransferase subunit M n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FSY7_9FLAO
N-6 DNA methylase
L2_023_126G1_scaffold_338_16
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17418..17873)
DNA (456bp) protein (152aa)
Type I restriction-modification system, DNA-methyltransferase subunit M {ECO:0000313|EMBL:EIA08684.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EIA08684.1};; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
Type I restriction-modification system, DNA-methyltransferase subunit M n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FSY7_9FLAO
L2_023_126G1_scaffold_338_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18587..20008)
DNA (1422bp) protein (474aa)
Putative PAS/PAC sensor protein n=2 Tax=Clostridium butyricum RepID=B1QWW0_CLOBU
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EEP53871.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
PAS/PAC sensor protein
L2_023_126G1_scaffold_338_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20098..20382)
DNA (285bp) protein (95aa)
Anti-sigma factor antagonist n=2 Tax=Clostridium butyricum RepID=M8KBH7_CLOBU
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
anti-sigma-factor antagonist
L2_023_126G1_scaffold_338_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20394..22394)
DNA (2001bp) protein (667aa)
Methyl-accepting chemotaxis protein signaling domain n=3 Tax=Clostridium butyricum RepID=B1QWW2_CLOBU
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EEP53344.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
methyl-accepting chemotaxis sensory transducer
L2_023_126G1_scaffold_338_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22472..22894)
DNA (423bp) protein (141aa)
UPI0003D59351 related cluster n=1 Tax=unknown RepID=UPI0003D59351
Anti-sigma F factor {ECO:0000313|EMBL:ETI91009.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ATP-binding region ATPase domain protein
L2_023_126G1_scaffold_338_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23082..23309)
DNA (228bp) protein (76aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EEP53677.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EEP53677.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
sudA: sulfide dehydrogenase subunit alpha (EC:1.8.-.- 1.18.1.2)
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JI25_CLOBU
Displaying 21 items

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