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L2_023_126G1_scaffold_383

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_383_1
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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127..1014
DNA (888bp) protein (296aa)
Sugar kinases, ribokinase family (EC:2.7.1.15)
Putative ribokinase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7C8_9FIRM
Putative ribokinase {ECO:0000313|EMBL:CCY32887.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L2_023_126G1_scaffold_383_2
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1337..1591
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D43719
Gp49-like PF05973 family protein {ECO:0000313|EMBL:CDC39706.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
hypothetical protein
L2_023_126G1_scaffold_383_3
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1688..1975
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D7ACAF
Putative transcriptional regulator with C-terminal CBS domains {ECO:0000313|EMBL:CDD98310.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
transcriptional regulator, XRE family
L2_023_126G1_scaffold_383_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2058..2768
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75775.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Acyl-ACP thioesterase
L2_023_126G1_scaffold_383_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2976..3806
DNA (831bp) protein (277aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L-rhamnulose 1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP68_9FIRM
L2_023_126G1_scaffold_383_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3958..4650
DNA (693bp) protein (231aa)
L-ribulose 5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGW9_9FIRM
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EES75773.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_126G1_scaffold_383_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5071..6297
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79729.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_023_126G1_scaffold_383_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6287..7105
DNA (819bp) protein (273aa)
Acetyl esterase family enzyme n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP80_9FIRM
Acetyl esterase family enzyme {ECO:0000313|EMBL:CDD79731.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
acetyl esterase
L2_023_126G1_scaffold_383_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7341..8180
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75770.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_383_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8239..11706
DNA (3468bp) protein (1156aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP95_9FIRM
L2_023_126G1_scaffold_383_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11779..12777
DNA (999bp) protein (333aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=2 Tax=Ruminococcus RepID=C6JGW4_9FIRM
L2_023_126G1_scaffold_383_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12781..14175
DNA (1395bp) protein (465aa)
H(+)-transporting two-sector ATPase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ30_9FIRM
H(+)-transporting two-sector ATPase {ECO:0000313|EMBL:CDD79737.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Trk-type K+ transport systems, membrane components
L2_023_126G1_scaffold_383_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14250..14903
DNA (654bp) protein (218aa)
TrkA-N domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQN6_9FIRM
TrkA-N domain-containing protein {ECO:0000313|EMBL:CDD79738.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
K+ transport systems, NAD-binding component
L2_023_126G1_scaffold_383_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14913..15686
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75765.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
rRNA methylases
L2_023_126G1_scaffold_383_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15707..16141
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79742.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Membrane protein implicated in regulation of membrane protease activity
L2_023_126G1_scaffold_383_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16144..17085
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75763.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Membrane protease subunits, stomatin/prohibitin homologs
L2_023_126G1_scaffold_383_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17122..18123
DNA (1002bp) protein (334aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=2 Tax=Ruminococcus RepID=C6JGV8_9FIRM
L2_023_126G1_scaffold_383_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18123..18926
DNA (804bp) protein (268aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGV7_9FIRM
Biotin-[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EES75761.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_126G1_scaffold_383_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18965..19330
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79746.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_023_126G1_scaffold_383_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19335..20342
DNA (1008bp) protein (336aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
tRNA-dihydrouridine synthase n=2 Tax=Ruminococcus RepID=C6JGV5_9FIRM
tRNA-U20-dihydrouridine synthase
L2_023_126G1_scaffold_383_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20568..21050
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=2 Tax=Ruminococcus RepID=C6JGV4_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcription elongation factor GreA
L2_023_126G1_scaffold_383_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21381..23417
DNA (2037bp) protein (679aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase n=2 Tax=Ruminococcus RepID=C6JGV3_9FIRM
L2_023_126G1_scaffold_383_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23692..25233
DNA (1542bp) protein (514aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGV2_9FIRM
Oligopeptide ABC transporter {ECO:0000313|EMBL:CDD76595.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide transport system, periplasmic component
L2_023_126G1_scaffold_383_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25302..26315
DNA (1014bp) protein (338aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGV1_9FIRM
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES75755.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L2_023_126G1_scaffold_383_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26308..27219
DNA (912bp) protein (304aa)
Oligopeptide/dipeptide ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEZ1_9FIRM
Oligopeptide/dipeptide ABC transporter {ECO:0000313|EMBL:CDD75898.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L2_023_126G1_scaffold_383_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27219..28223
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75753.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L2_023_126G1_scaffold_383_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28220..29107
DNA (888bp) protein (296aa)
Oligopeptide ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CD82_9FIRM
Oligopeptide ABC transporter {ECO:0000313|EMBL:CDD75900.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L2_023_126G1_scaffold_383_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29208..30890
DNA (1683bp) protein (561aa)
Phosphomannomutase (EC:5.4.2.8)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75751.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_126G1_scaffold_383_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31115..31360
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75750.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_383_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31451..32575
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75749.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized Fe-S center protein
Displaying items 1-30 of 35 in total

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