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L2_023_126G1_scaffold_446

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_446_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(399..1037)
DNA (639bp) protein (213aa)
Uncharacterized metal-binding protein conserved in archaea n=4 Tax=Clostridiales RepID=D4M0I5_9FIRM
Uncharacterized metal-binding protein conserved in archaea
Uncharacterized metal-binding protein conserved in archaea {ECO:0000313|EMBL:CBL27545.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_023_126G1_scaffold_446_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1580..2425)
DNA (846bp) protein (282aa)
Predicted transcriptional regulators n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0I6_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL27546.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_023_126G1_scaffold_446_3
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2982..3350
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6GI28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB21284.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
Protein of unknown function (DUF2500).
L2_023_126G1_scaffold_446_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3412..3696
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00037684E1
Uncharacterized protein {ECO:0000313|EMBL:EES78902.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_446_5
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

Not on your lists

3734..4168
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003670417
Uncharacterized protein {ECO:0000313|EMBL:CCZ27794.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
hypothetical protein
L2_023_126G1_scaffold_446_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4275..5501)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J999_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78901.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Major Facilitator Superfamily.
L2_023_126G1_scaffold_446_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5667..6554
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79139.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
AraC-type DNA-binding domain-containing proteins
L2_023_126G1_scaffold_446_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6622..8220)
DNA (1599bp) protein (533aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J997_9FIRM
L2_023_126G1_scaffold_446_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8235..8954)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J996_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78898.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_446_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9051..9743
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J995_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78897.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_446_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10081..11130
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77306.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Dioxygenases related to 2-nitropropane dioxygenase
L2_023_126G1_scaffold_446_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11241..12602)
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J991_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EES78893.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative efflux protein, MATE family
L2_023_126G1_scaffold_446_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12886..13692)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J990_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78892.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Putative cell wall binding repeat.
L2_023_126G1_scaffold_446_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14022..17609
DNA (3588bp) protein (1196aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77310.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_023_126G1_scaffold_446_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17593..18840
DNA (1248bp) protein (416aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J988_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77312.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_023_126G1_scaffold_446_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18854..19648
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J987_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78889.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_446_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19756..20652
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77316.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L2_023_126G1_scaffold_446_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20788..21438
DNA (651bp) protein (217aa)
Amino acid ABC transporter membrane protein PAAT family (TC 3.A.1.3.-) n=2 Tax=Ruminococcus RepID=R7CHW1_9FIRM
Amino acid ABC transporter membrane protein PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CDD77317.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L2_023_126G1_scaffold_446_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21505..22191
DNA (687bp) protein (229aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J985_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77318.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
amino acid ABC transporter ATP-binding protein
L2_023_126G1_scaffold_446_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22320..23753
DNA (1434bp) protein (478aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J984_9FIRM
L2_023_126G1_scaffold_446_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23898..25178
DNA (1281bp) protein (427aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH95_9FIRM
L2_023_126G1_scaffold_446_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25272..26099
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77321.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L2_023_126G1_scaffold_446_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26447..27016
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J981_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78883.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_446_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26955..27488
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J980_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78882.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_126G1_scaffold_446_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27504..28376)
DNA (873bp) protein (291aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSE9_9FIRM
L2_023_126G1_scaffold_446_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28672..29529
DNA (858bp) protein (286aa)
Sigma-E processing peptidase SpoIIGA n=2 Tax=Ruminococcus RepID=C6J978_9FIRM
Sigma-E processing peptidase SpoIIGA {ECO:0000313|EMBL:EES78880.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Sporulation factor SpoIIGA.
L2_023_126G1_scaffold_446_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29547..30257
DNA (711bp) protein (237aa)
RNA polymerase sigma factor n=2 Tax=Ruminococcus RepID=C6J977_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
RNA polymerase, sigma 29 subunit, SigE
L2_023_126G1_scaffold_446_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30430..31401
DNA (972bp) protein (324aa)
Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins (EC:1.97.1.4)
Radical SAM domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNZ4_9FIRM
Radical SAM domain-containing protein {ECO:0000313|EMBL:CDD79969.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_023_126G1_scaffold_446_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31576..33015)
DNA (1440bp) protein (480aa)
TrkH family potassium uptake protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J975_9FIRM
TrkH family potassium uptake protein {ECO:0000313|EMBL:EES78877.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Trk-type K+ transport systems, membrane components
L2_023_126G1_scaffold_446_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33028..34386)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J974_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78876.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
K+ transport systems, NAD-binding component
Displaying items 1-30 of 46 in total

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