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L2_023_126G1_scaffold_896

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_896_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..309
DNA (309bp) protein (103aa)
Efflux ABC transporter, permease protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LY78_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERJ94449.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC-type transport system, involved in lipoprotein release, permease component
L2_023_126G1_scaffold_896_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(361..606)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=root RepID=U2M546_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94448.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L2_023_126G1_scaffold_896_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(631..2583)
DNA (1953bp) protein (651aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCJ5_9FIRM
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL02558.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_023_126G1_scaffold_896_4
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(2639..3646)
DNA (1008bp) protein (336aa)
Virulence protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RB42_9FIRM
Virulence protein {ECO:0000313|EMBL:CCZ35989.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Virulence protein
L2_023_126G1_scaffold_896_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3765..3956)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CPZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32597.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L2_023_126G1_scaffold_896_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3919..5187)
DNA (1269bp) protein (423aa)
Plasmid recombination enzyme n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCJ6_9FIRM
Plasmid recombination enzyme.
Plasmid recombination enzyme {ECO:0000313|EMBL:CBL02559.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_023_126G1_scaffold_896_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5537..6910)
DNA (1374bp) protein (458aa)
Phage/plasmid primase, P4 family, C-terminal domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCJ7_9FIRM
phage/plasmid primase, P4 family, C-terminal domain
Phage/plasmid primase, P4 family, C-terminal domain {ECO:0000313|EMBL:CBL02560.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_023_126G1_scaffold_896_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6885..7601)
DNA (717bp) protein (239aa)
DNA primase (Bacterial type) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCJ8_9FIRM
DNA primase (bacterial type)
DNA primase (Bacterial type) {ECO:0000313|EMBL:CBL02561.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_023_126G1_scaffold_896_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7734..7943
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCJ9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02562.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_023_126G1_scaffold_896_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7943..8770
DNA (828bp) protein (276aa)
Helix-turn-helix n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCK0_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL02563.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_023_126G1_scaffold_896_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8754..9392
DNA (639bp) protein (213aa)
DNA-directed RNA polymerase specialized sigma subunit n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCK1_9FIRM
DNA-directed RNA polymerase specialized sigma subunit
DNA-directed RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:CBL02564.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_023_126G1_scaffold_896_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9419..10090
DNA (672bp) protein (224aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCK3_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL02566.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_023_126G1_scaffold_896_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10087..11100
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Signal transduction histidine kinase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCK4_9FIRM
Signal transduction histidine kinase
L2_023_126G1_scaffold_896_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11202..11486
DNA (285bp) protein (95aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3N8_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN78852.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Displaying 14 items

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