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L2_023_126G1_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_13_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(111..1043)
DNA (933bp) protein (311aa)
Periplasmic binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAU4_9CLOT
Periplasmic binding protein {ECO:0000313|EMBL:EKY25094.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ferric siderophore ABC transporter,substrate-binding protein
L2_023_126G1_scaffold_13_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1063..1818)
DNA (756bp) protein (252aa)
Putative ferrichrome ABC transporter, ATP-binding protein FhuC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAV0_9CLOT
Putative ferrichrome ABC transporter, ATP-binding protein FhuC {ECO:0000313|EMBL:EKY25093.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
iron ABC transporter ATP-binding protein
L2_023_126G1_scaffold_13_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1815..2765)
DNA (951bp) protein (317aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBV3_9CLOT
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EKY25092.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
iron chelate uptake ABC transporter permease
L2_023_126G1_scaffold_13_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2755..3708)
DNA (954bp) protein (318aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAW7_9CLOT
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EKY25091.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
iron chelate uptake ABC transporter permease
L2_023_126G1_scaffold_13_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3880..4578
DNA (699bp) protein (233aa)
Helix-turn-helix, AraC domain-containing protein n=1 Tax=Pelosinus fermentans DSM 17108 RepID=I9BUE3_9FIRM
AraC family transcriptional regulator
Helix-turn-helix domain protein {ECO:0000313|EMBL:AJD30017.1}; TaxID=1408284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum Prevot_594.;"
L2_023_126G1_scaffold_13_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4652..5593)
DNA (942bp) protein (314aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UDU0_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ67017.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_023_126G1_scaffold_13_7
Bacillus sp. SJS, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5795..7660
DNA (1866bp) protein (622aa)
Conserved membrane-spanning protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CPY0_9BACI
Membrane protein {ECO:0000313|EMBL:KEZ55795.1}; TaxID=1423321 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. SJS.;"
hypothetical protein
L2_023_126G1_scaffold_13_8
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7719..11513)
DNA (3795bp) protein (1265aa)
Pullulanase family protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FWY9_9CLOT
Pullulanase family protein {ECO:0000313|EMBL:CDB16615.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
pullulanase
L2_023_126G1_scaffold_13_9
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11748..13220)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AY44_9FIRM
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KHS57300.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
6-phospho-beta-glucosidase
L2_023_126G1_scaffold_13_10
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13233..15080)
DNA (1848bp) protein (616aa)
bglP2; PTS system beta-glucoside-specific EIIBCA component BglP (EC:2.7.1.69 2.7.1.-)
Putative ATP synthase F0, A subunit n=2 Tax=Clostridiales RepID=A7AZX0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:KHS57299.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
L2_023_126G1_scaffold_13_11
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15233..16108)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9W9N2_9CLOT
Transcription antiterminator LicT {ECO:0000313|EMBL:KHS57298.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
bglG1; transcription antiterminator
L2_023_126G1_scaffold_13_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16418..17776)
DNA (1359bp) protein (453aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Clostridium botulinum E RepID=B2V0B8_CLOBA
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:AIY82541.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_023_126G1_scaffold_13_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17786..18079)
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0B7_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08833.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_023_126G1_scaffold_13_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18101..18820)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLH7_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41664.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_023_126G1_scaffold_13_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18916..19503)
DNA (588bp) protein (196aa)
DNA-binding protein, ComEA family n=2 Tax=Clostridium botulinum B RepID=B2TKI9_CLOBB
Competence ComEA helix-hairpin-helix repeat region domain protein {ECO:0000313|EMBL:AIY81638.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
DNA-binding protein, ComEA family
L2_023_126G1_scaffold_13_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19652..20956
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WEL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU71662.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
D-alanyl-D-alanine carboxypeptidase family protein
L2_023_126G1_scaffold_13_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20966..21868)
DNA (903bp) protein (301aa)
yjbO; RNA pseudouridine synthase YjbO (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Pseudouridine synthase, RluA family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2M4_9CLOT
L2_023_126G1_scaffold_13_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21870..23279)
DNA (1410bp) protein (470aa)
Membrane-bound protein LytR n=2 Tax=Clostridium botulinum B RepID=B2TKI5_CLOBB
membrane-bound protein LytR
Membrane-bound protein LytR {ECO:0000313|EMBL:ACD24945.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_023_126G1_scaffold_13_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23292..23861)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K319_CLOBU
HD domain protein
Phosphohydrolase {ECO:0000313|EMBL:KJU73234.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_023_126G1_scaffold_13_20

Not on your lists

comp(23863..24465)
DNA (603bp) protein (201aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=3 Tax=Clostridium butyricum RepID=B1R1B2_CLOBU
Putative nicotinate-nucleotide adenylyltransferase {ECO:0000313|EMBL:ETJ16738.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_023_126G1_scaffold_13_21
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24467..24772)
DNA (306bp) protein (102aa)
Putative CRS1/YhbY domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EN08_9CLOT
Putative CRS1/YhbY domain protein {ECO:0000313|EMBL:CDG02577.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
CRS1 / YhbY domain protein
L2_023_126G1_scaffold_13_22
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24789..26075)
DNA (1287bp) protein (429aa)
GTPase Obg n=1 Tax=Clostridium colicanis 209318 RepID=N9WE18_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
cgtA; Obg family GTPase CgtA
L2_023_126G1_scaffold_13_23
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26247..26546)
DNA (300bp) protein (100aa)
50S ribosomal protein L27 n=2 Tax=Clostridium RepID=RL27_CLOB8
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_023_126G1_scaffold_13_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26550..26921)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V0A6_CLOBA
hypothetical protein
Ribosomal protein {ECO:0000313|EMBL:KIL08822.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_023_126G1_scaffold_13_25
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26927..27235)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Clostridium colicanis 209318 RepID=N9XZF6_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
rplU; 50S ribosomal protein L21
L2_023_126G1_scaffold_13_26
unknown

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comp(27544..27834)
DNA (291bp) protein (97aa)

This feature has no annotations

L2_023_126G1_scaffold_13_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27824..28372)
DNA (549bp) protein (183aa)
Sigma-70 region 2 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QES5_9CLOT
Sigma-70 region 2 {ECO:0000313|EMBL:EKY26436.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
RNA polymerase subunit sigma
L2_023_126G1_scaffold_13_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28654..30393)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26435.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_023_126G1_scaffold_13_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30524..32329)
DNA (1806bp) protein (602aa)
chitinase D (EC:3.2.1.14)
Chitinase {ECO:0000313|EMBL:CDH90294.1}; EC=3.2.1.14 {ECO:0000313|EMBL:CDH90294.1};; Chitinase A {ECO:0000313|EMBL:ACD23618.1}; EC=3.2.1.14 {ECO:0000313|EMBL:ACD23618.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Chitinase A n=2 Tax=Clostridium botulinum B RepID=B2TJG0_CLOBB
L2_023_126G1_scaffold_13_30
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32579..34414
DNA (1836bp) protein (612aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00030E6905
Carbohydrate-binding family V/XII protein {ECO:0000313|EMBL:AJG99222.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
chitinase
Displaying items 1-30 of 108 in total

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