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L2_023_126G1_scaffold_105

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_105_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..516
DNA (516bp) protein (172aa)
Reverse rubrerythrin-1 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q3F4_9CLOT
Reverse rubrerythrin-1 {ECO:0000313|EMBL:EJZ50504.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rubredoxin/rubrerythrin
L2_023_126G1_scaffold_105_2
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(451..1431)
DNA (981bp) protein (327aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WDF6_DESOD
alpha/beta hydrolase
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AET67925.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L2_023_126G1_scaffold_105_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1594..3027
DNA (1434bp) protein (478aa)
cls1; cardiolipin synthase Cls (EC:2.7.8.-)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Cardiolipin synthase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLK0_CLOSA
L2_023_126G1_scaffold_105_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3363..4376
DNA (1014bp) protein (338aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EDS09021.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EDS09021.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHQ3_9FIRM
L2_023_126G1_scaffold_105_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4395..5459
DNA (1065bp) protein (355aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
3-dehydroquinate synthase n=1 Tax=Clostridium difficile P38 RepID=T4PN73_CLODI
aroB; 3-dehydroquinate synthase
L2_023_126G1_scaffold_105_6
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5459..6757
DNA (1299bp) protein (433aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MC93_9CLOT
L2_023_126G1_scaffold_105_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6735..7829
DNA (1095bp) protein (365aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Clostridium difficile CD69 RepID=T3A6P0_CLODI
L2_023_126G1_scaffold_105_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7817..8956
DNA (1140bp) protein (380aa)
UPI0003D67DE2 related cluster n=1 Tax=unknown RepID=UPI0003D67DE2
P-protein {ECO:0000313|EMBL:ETI88225.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_023_126G1_scaffold_105_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8967..9773
DNA (807bp) protein (269aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Shikimate dehydrogenase n=12 Tax=Clostridium difficile RepID=C9XT73_CLODC
aroE; shikimate dehydrogenase
L2_023_126G1_scaffold_105_10
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9789..10304
DNA (516bp) protein (172aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
Shikimate kinase n=1 Tax=Clostridium colicanis 209318 RepID=N9XSI9_9CLOT
shikimate kinase family protein
L2_023_126G1_scaffold_105_11
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10309..10737
DNA (429bp) protein (143aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
3-dehydroquinate dehydratase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MC98_9CLOT
3-dehydroquinate dehydratase
L2_023_126G1_scaffold_105_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10838..11875
DNA (1038bp) protein (346aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase AroF (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase AroF {ECO:0000313|EMBL:AJH01635.1}; EC=2.5.1.54 {ECO:0000313|EMBL:AJH01635.1};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Clostridium beijerinckii RepID=UPI0002E5E6FD
L2_023_126G1_scaffold_105_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11896..12729
DNA (834bp) protein (278aa)
Prephenate dehydrogenase TyrA {ECO:0000313|EMBL:AJH01634.1}; EC=1.3.1.12 {ECO:0000313|EMBL:AJH01634.1};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
prephenate dehydrogenase n=1 Tax=Clostridium beijerinckii RepID=UPI0003073366
prephenate dehydrogenase
L2_023_126G1_scaffold_105_14
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12982..13524)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3A0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ02634.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
CYTH domain protein
L2_023_126G1_scaffold_105_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13693..14400
DNA (708bp) protein (236aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Purine nucleoside phosphorylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H757_9CLOT
deoD; purine nucleoside phosphorylase
L2_023_126G1_scaffold_105_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14435..15208
DNA (774bp) protein (258aa)
srtB; sortase, SrtB family (EC:3.4.22.71)
Sortase, SrtB family {ECO:0000313|EMBL:AIY84337.1}; EC=3.4.22.71 {ECO:0000313|EMBL:AIY84337.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Sortase, SrtB family n=1 Tax=Turicibacter sp. HGF1 RepID=F0HCG1_9FIRM
L2_023_126G1_scaffold_105_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15382..16974
DNA (1593bp) protein (531aa)
Na/Pi cotransporter n=1 Tax=Clostridium sp. JC122 RepID=UPI0002885DFD
Na/Pi-cotransporter family protein/PhoU family protein
Na+/Pi-cotransporter family protein {ECO:0000313|EMBL:AIY80170.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_023_126G1_scaffold_105_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17051..18091
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEW4_9CLOT
37-kD nucleoid-associated bacterial family protein
37-kD nucleoid-associated bacterial family protein {ECO:0000313|EMBL:AIY84231.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_023_126G1_scaffold_105_19
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18167..19201)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H530_9CLOT
ApbE family lipoprotein {ECO:0000313|EMBL:EOR20273.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
apbE family protein
L2_023_126G1_scaffold_105_20
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19308..19745)
DNA (438bp) protein (146aa)
FMN-binding domain-containing protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTD6_9CLOT
FMN-binding domain-containing protein {ECO:0000313|EMBL:EOR20272.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_023_126G1_scaffold_105_21
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20100..21968
DNA (1869bp) protein (623aa)
NADH dehydrogenase n=1 Tax=Clostridium intestinale URNW RepID=U2NSJ4_9CLOT
NADH dehydrogenase {ECO:0000313|EMBL:ERK32143.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
pyridine nucleotide-disulfide oxidoreductase family protein
L2_023_126G1_scaffold_105_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22097..22495
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8S8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99283.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_023_126G1_scaffold_105_23
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22507..23034
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20269.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_023_126G1_scaffold_105_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23037..24002
DNA (966bp) protein (322aa)
Trans-hexaprenyltranstransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT72_9CLOT
Trans-hexaprenyltranstransferase {ECO:0000313|EMBL:EOR20268.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
polyprenyl synthetase family protein
L2_023_126G1_scaffold_105_25
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24011..24898)
DNA (888bp) protein (296aa)
LysR family transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTC9_9CLOT
LysR family transcriptional regulator {ECO:0000313|EMBL:EOR20267.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
LysR family transcriptional regulator
L2_023_126G1_scaffold_105_26
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25027..26193
DNA (1167bp) protein (389aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZ51_9CLOT
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EHI97403.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
putative lipoprotein
L2_023_126G1_scaffold_105_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26155..27282)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8S6_9CLOT
Glycosyl transferase {ECO:0000313|EMBL:KJU73110.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
glycosyl transferases group 1 family protein
L2_023_126G1_scaffold_105_28
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27404..28399
DNA (996bp) protein (332aa)
Spore coat protein, CotS family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M8R4_9CLOT
spore coat protein, CotS family
Spore coat protein, CotS family {ECO:0000313|EMBL:AGF54324.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_023_126G1_scaffold_105_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28441..29145
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URX0_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES49303.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L2_023_126G1_scaffold_105_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29162..30217
DNA (1056bp) protein (352aa)
Spore coat protein, CotS family n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZG5_CLOBA
CotS family spore coat protein
Spore coat protein {ECO:0000313|EMBL:KIL08727.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
Displaying items 1-30 of 74 in total

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