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L2_023_126G1_scaffold_546

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_546_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..248)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y604_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84733.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_023_126G1_scaffold_546_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(498..878)
DNA (381bp) protein (127aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
endoribonuclease endoA (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIJ0_9CLOT
L2_023_126G1_scaffold_546_3
unknown

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comp(860..1090)
DNA (231bp) protein (77aa)
hypothetical protein
L2_023_126G1_scaffold_546_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1214..1843)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4N1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99516.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_023_126G1_scaffold_546_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1902..3404)
DNA (1503bp) protein (501aa)
YjeF domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIJ7_9CLOT
yjeF-related family protein
YjeF-related family protein {ECO:0000313|EMBL:AIY83556.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_023_126G1_scaffold_546_6
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3408..3785)
DNA (378bp) protein (126aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
4''''-phosphopantetheinyl transferase n=1 Tax=Clostridium beijerinckii RepID=UPI0003136D92
L2_023_126G1_scaffold_546_7
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3816..4142)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U5RV70_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK13383.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
L2_023_126G1_scaffold_546_8
unknown

Not on your lists

comp(4251..4358)
DNA (108bp) protein (36aa)

This feature has no annotations

L2_023_126G1_scaffold_546_9
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4538..4948)
DNA (411bp) protein (137aa)
Single-stranded DNA-binding protein n=2 Tax=environmental samples RepID=R6FRM9_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
ssb; single-stranded DNA-binding family protein
L2_023_126G1_scaffold_546_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5088..5927)
DNA (840bp) protein (280aa)
YihY family protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V006_CLOBA
Ribonuclease BN {ECO:0000313|EMBL:KJU72316.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
yihY; YihY family inner membrane domain protein
L2_023_126G1_scaffold_546_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6196..7068
DNA (873bp) protein (291aa)
galactose mutarotase n=1 Tax=Clostridium beijerinckii RepID=UPI0002DDD39D
aldose 1-epimerase family protein
Aldose 1-epimerase family protein {ECO:0000313|EMBL:AIY84981.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_023_126G1_scaffold_546_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7097..9385)
DNA (2289bp) protein (763aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XV74_9CLOT
ATP-dependent helicase {ECO:0000313|EMBL:KJU72318.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
DEAD_2 family protein
L2_023_126G1_scaffold_546_13
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9458..10048)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F6P3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG00693.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L2_023_126G1_scaffold_546_14
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10536..10781
DNA (246bp) protein (82aa)
Transcriptional regulator, AbrB family n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAQ9_9CLOT
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EHJ02318.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
abrB; AbrB family transcriptional regulator
L2_023_126G1_scaffold_546_15
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11041..11886)
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
YraL family putative S-adenosylmethionine-dependent methyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH17_9CLOT
S-adenosylmethionine-dependent methyltransferase, YraL family
L2_023_126G1_scaffold_546_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11886..12641)
DNA (756bp) protein (252aa)
Methyltransferase small n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9L9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD15459.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
small; methyltransferase Small
L2_023_126G1_scaffold_546_17
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12995..14227)
DNA (1233bp) protein (411aa)
Putative SagA protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EHM5_9CLOT
Putative SagA protein {ECO:0000313|EMBL:CDG00697.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
SagA protein
L2_023_126G1_scaffold_546_18
unknown

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comp(14596..14700)
DNA (105bp) protein (35aa)

This feature has no annotations

L2_023_126G1_scaffold_546_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15227..15874
DNA (648bp) protein (216aa)
Putative HAD-superfamily hydrolase, subfamily IA,variant 3 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EWU8_9CLOT
Putative HAD-superfamily hydrolase, subfamily IA,variant 3 {ECO:0000313|EMBL:CDG00701.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
Displaying 19 items

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