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L2_023_246G1_scaffold_1396

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_1396_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..316
DNA (315bp) protein (105aa)
Divergent AAA domain-containing protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXE8_9BIFI
transcriptional regulator
Divergent AAA domain protein {ECO:0000313|EMBL:EIJ24500.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_023_246G1_scaffold_1396_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(321..1733)
DNA (1413bp) protein (471aa)
ABC-type multidrug transport system permease component n=13 Tax=Bifidobacterium longum RepID=B3DSG4_BIFLD
abc-type multidrug transport system permease component
Multidrug permease ABC transporter {ECO:0000313|EMBL:KEY22090.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_023_246G1_scaffold_1396_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1720..2958)
DNA (1239bp) protein (413aa)
ABC-type multidrug transport system permease component n=16 Tax=Bifidobacterium longum RepID=B3DSG5_BIFLD
hypothetical protein
ABC-type multidrug transport system permease component {ECO:0000313|EMBL:ACD98084.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_023_246G1_scaffold_1396_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2985..3884)
DNA (900bp) protein (300aa)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B415_BIFLN
ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding component {ECO:0000313|EMBL:BAJ70894.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_023_246G1_scaffold_1396_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3984..4091)
DNA (108bp) protein (36aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DSG7_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21041.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_023_246G1_scaffold_1396_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4270..5610
DNA (1341bp) protein (447aa)
Signal transduction histidine kinase n=2 Tax=Bifidobacterium longum subsp. longum RepID=E4R474_BIFLM
signal transduction histidine kinase
Histidine kinase dimerization/phosphoacceptor domain protein {ECO:0000313|EMBL:EIJ30293.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_023_246G1_scaffold_1396_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5610..6263
DNA (654bp) protein (218aa)
Response regulator of two-component system n=15 Tax=Bifidobacterium RepID=Q8G5U9_BIFLO
two-component response regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:KEY22086.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_023_246G1_scaffold_1396_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6447..7070)
DNA (624bp) protein (208aa)
Phosphate transport regulator n=14 Tax=Bifidobacterium RepID=B3DSH0_BIFLD
hypothetical protein
Phosphate transport regulator {ECO:0000313|EMBL:ACD98089.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_023_246G1_scaffold_1396_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7088..8140)
DNA (1053bp) protein (351aa)
Phosphate/sulphate permease n=15 Tax=Bifidobacterium RepID=B3DSH1_BIFLD
phosphate transport protein
Inorganic phosphate transporter PiT {ECO:0000313|EMBL:KEY22084.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_023_246G1_scaffold_1396_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8260..8457)
DNA (198bp) protein (66aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DSH2_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY22083.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_023_246G1_scaffold_1396_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8515..10914)
DNA (2400bp) protein (800aa)
Carbon starvation protein n=6 Tax=Bifidobacterium longum RepID=B3DSH3_BIFLD
cstA; csta
Carbon starvation protein {ECO:0000313|EMBL:BAJ70888.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_023_246G1_scaffold_1396_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11159..12454
DNA (1296bp) protein (432aa)
Alpha amylase, catalytic domain protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EAK2_BIFLI
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEQ55046.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
alpha-amylase
L2_023_246G1_scaffold_1396_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12483..12986)
DNA (504bp) protein (168aa)
AcrR-type transcriptional regulator n=11 Tax=Bifidobacterium RepID=B3DSH5_BIFLD
transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EIJ24501.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_023_246G1_scaffold_1396_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13266..15272)
DNA (2007bp) protein (669aa)
ATP-dependent RNA helicase n=1 Tax=Bifidobacterium longum E18 RepID=V6XXU9_BIFLN
ATP-dependent RNA helicase {ECO:0000313|EMBL:ESV33316.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
DEAD/DEAH box helicase
L2_023_246G1_scaffold_1396_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15700..16989)
DNA (1290bp) protein (430aa)
Xanthine/uracil permease n=8 Tax=Bifidobacterium RepID=B3DSH7_BIFLD
uraA2; uraa2
Uracil-xanthine permease {ECO:0000313|EMBL:BAP83414.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_023_246G1_scaffold_1396_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17094..17924)
DNA (831bp) protein (277aa)
Phosphoglycerate mutase family protein n=15 Tax=Bifidobacterium RepID=B3DSH8_BIFLD
hypothetical protein
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:CBK70646.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_023_246G1_scaffold_1396_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17975..18556)
DNA (582bp) protein (194aa)
Phosphoserine phosphatase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DSH9_BIFLD
serB1; phosphoserine phosphatase
Phosphoserine phosphatase {ECO:0000313|EMBL:ACD98098.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_023_246G1_scaffold_1396_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18641..19195
DNA (555bp) protein (185aa)
Uncharacterized protein n=9 Tax=Bifidobacterium longum RepID=V6XVN5_BIFLN
hypothetical protein
DNA-binding helix-turn-helix domain protein {ECO:0000313|EMBL:EIJ30296.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_023_246G1_scaffold_1396_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19315..20478)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=C2GTP6_BIFLN
Putative virion core protein (lumpy skin disease virus)
Uncharacterized protein {ECO:0000313|EMBL:EEI81453.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_023_246G1_scaffold_1396_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20561..20797)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTT3_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY31932.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_023_246G1_scaffold_1396_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20851..22395)
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI000303535F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW43650.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_023_246G1_scaffold_1396_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22829..23269
DNA (441bp) protein (147aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=Q8G5T6_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI81455.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_023_246G1_scaffold_1396_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23331..25031
DNA (1701bp) protein (567aa)
serine/threonine protein kinase n=1 Tax=Bifidobacterium breve RepID=UPI00030A3908
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AIW43648.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_023_246G1_scaffold_1396_24
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25069..26559)
DNA (1491bp) protein (497aa)
Efflux transporter protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NH81_9BIFI
MFS transporter
Efflux transporter protein {ECO:0000313|EMBL:CCY96482.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Displaying 24 items

View Taxonomy