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L2_023_246G1_scaffold_1454

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_1454_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(103..1113)
DNA (1011bp) protein (337aa)
Possible reductase n=8 Tax=Bifidobacterium RepID=Q8G7H6_BIFLO
reductase
Oxidoreductase {ECO:0000313|EMBL:ESV32937.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_023_246G1_scaffold_1454_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1287..1715
DNA (429bp) protein (143aa)
SoxR-type transcriptional regulator n=14 Tax=Bifidobacterium RepID=B3DTL1_BIFLD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ65995.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_023_246G1_scaffold_1454_3
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1815..2441)
DNA (627bp) protein (209aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=V6XZC6_BIFLN
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCY95754.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_023_246G1_scaffold_1454_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2535..3857
DNA (1323bp) protein (441aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Nicotinate phosphoribosyltransferase n=12 Tax=Bifidobacterium RepID=Q8G7H9_BIFLO
pncB; pncb
L2_023_246G1_scaffold_1454_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4824..5666
DNA (843bp) protein (281aa)
Transcriptional regulator, Fis family n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZY70_BIFLJ
Fis family transcriptional regulator {ECO:0000313|EMBL:KFI72745.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Fis family transcriptional regulator
L2_023_246G1_scaffold_1454_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5798..6574
DNA (777bp) protein (259aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Ribonuclease PH n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DTK8_BIFLD
rph; rph
L2_023_246G1_scaffold_1454_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6617..7375
DNA (759bp) protein (253aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=NTPA_BIFLS
deoxyribonucleotide triphosphate pyrophosphatase
L2_023_246G1_scaffold_1454_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7822..9090
DNA (1269bp) protein (423aa)
Peptidoglycan branched peptide synthesis protein n=9 Tax=Bifidobacterium longum RepID=E8MGU8_BIFL2
peptidoglycan branched peptide synthesis protein
Peptidoglycan bridge formation protein FemAB {ECO:0000313|EMBL:KEY23420.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_023_246G1_scaffold_1454_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9164..10474
DNA (1311bp) protein (437aa)
Uncharacterized protein involved in methicillin resistance n=9 Tax=Bifidobacterium RepID=D6D9Z1_BIFLN
peptidoglycan branched peptide synthesis protein
FemAB family protein {ECO:0000313|EMBL:EIJ32572.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_023_246G1_scaffold_1454_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10524..11804
DNA (1281bp) protein (427aa)
Methicillin resistance protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZY75_BIFLJ
Peptidoglycan bridge formation protein FemAB {ECO:0000313|EMBL:KHD95123.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
methicillin resistance protein
L2_023_246G1_scaffold_1454_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11887..12888)
DNA (1002bp) protein (334aa)
Transporter, auxin efflux carrier (AEC) family protein n=6 Tax=Bifidobacterium RepID=C2GTA9_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66004.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_023_246G1_scaffold_1454_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13610..14905
DNA (1296bp) protein (432aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Glucose-6-phosphate isomerase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MRT1_BIFL1
glucose-6-phosphate isomerase
Displaying 12 items

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