ggKbase home page

L2_023_246G1_scaffold_1884

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_1884_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..561)
DNA (561bp) protein (187aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E8C1_BIFLI
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEI81801.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
ABC transporter
L2_023_246G1_scaffold_1884_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(710..2302)
DNA (1593bp) protein (531aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MRU1_BIFL1
Membrane protein {ECO:0000313|EMBL:KHD95112.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L2_023_246G1_scaffold_1884_3
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2577..3293
DNA (717bp) protein (239aa)
Peptidase n=4 Tax=Bifidobacterium RepID=F8ASW4_BIFLN
peptidase
Peptidase C26 {ECO:0000313|EMBL:EFV38005.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_023_246G1_scaffold_1884_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3477..4994)
DNA (1518bp) protein (506aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L-arabinose isomerase n=20 Tax=root RepID=ARAA_BIFLD
araA; araa
L2_023_246G1_scaffold_1884_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5226..5918)
DNA (693bp) protein (231aa)
Ribulose-5-phosphate 4-epimerase n=18 Tax=root RepID=B3DTJ6_BIFLD
araD; arad
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:AAN24114.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_023_246G1_scaffold_1884_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6003..7649)
DNA (1647bp) protein (549aa)
Sugar (Pentulose and hexulose) kinases n=9 Tax=Bifidobacterium longum RepID=D6D9Y2_BIFLN
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EIJ32602.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Sugar (pentulose and hexulose) kinases
L2_023_246G1_scaffold_1884_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7804..8919)
DNA (1116bp) protein (372aa)
LacI-type transcriptional regulator n=11 Tax=root RepID=Q8G7J0_BIFLO
transcriptional regulator, LacI family
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY23397.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_023_246G1_scaffold_1884_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9046..9873)
DNA (828bp) protein (276aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Ribonuclease n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZY82_BIFLJ
rnhB; ribonuclease H
L2_023_246G1_scaffold_1884_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9975..10814)
DNA (840bp) protein (280aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Signal peptidase I n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XWP1_9BIFI
signal peptidase I
L2_023_246G1_scaffold_1884_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10869..11225)
DNA (357bp) protein (119aa)
50S ribosomal protein L19 n=21 Tax=root RepID=B3DTK1_BIFLD
50S ribosomal protein L19
Ribosomal protein L19 {ECO:0000313|EMBL:ACJ51541.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_023_246G1_scaffold_1884_11
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11969..13759
DNA (1791bp) protein (597aa)
ABC-type anion transport system, duplicated permease component n=4 Tax=Bifidobacterium RepID=D6D9Y7_BIFLN
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:EFV37997.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
ABC-type anion transport system, duplicated permease component
L2_023_246G1_scaffold_1884_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13778..15202
DNA (1425bp) protein (475aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=2 Tax=Bifidobacterium longum RepID=V6XUU3_BIFLN
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:ESV32948.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
ABC transporter ATP-binding protein
L2_023_246G1_scaffold_1884_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15602..16060)
DNA (459bp) protein (153aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Glucose-6-phosphate isomerase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MRT1_BIFL1
glucose-6-phosphate isomerase
Displaying 13 items

View Taxonomy