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L2_023_246G1_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 338 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_40_1
unknown

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3..443
DNA (441bp) protein (147aa)

This feature has no annotations

L2_023_246G1_scaffold_40_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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440..673
DNA (234bp) protein (78aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NR73_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDN01569.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_023_246G1_scaffold_40_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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1262..2227
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47761.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
copper amine oxidase-like domain-containing protein
L2_023_246G1_scaffold_40_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2374..2877
DNA (504bp) protein (168aa)
N utilization substance protein B homolog n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBN4_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
nusB; antitermination protein NusB
L2_023_246G1_scaffold_40_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2880..3824
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47763.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
peptidase M22 glycoprotease
L2_023_246G1_scaffold_40_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3821..5047
DNA (1227bp) protein (409aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
xseA; exonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBN6_9FIRM
L2_023_246G1_scaffold_40_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5122..5358
DNA (237bp) protein (79aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBN7_9FIRM
exodeoxyribonuclease VII small subunit
L2_023_246G1_scaffold_40_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5361..6242
DNA (882bp) protein (294aa)
Geranylgeranyl diphosphate synthase, type II n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBN8_9FIRM
Geranylgeranyl diphosphate synthase, type II {ECO:0000313|EMBL:EGJ47766.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
polyprenyl synthetase
L2_023_246G1_scaffold_40_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6290..6745
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47767.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_246G1_scaffold_40_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6781..8634
DNA (1854bp) protein (618aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP0_9FIRM
L2_023_246G1_scaffold_40_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8624..9430
DNA (807bp) protein (269aa)
23S rRNA (-2'-O)/16S rRNA (-2'-O)-methyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP1_9FIRM
23S rRNA (-2'-O)/16S rRNA (-2'-O)-methyltransferase {ECO:0000313|EMBL:EGJ47769.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hemolysin
L2_023_246G1_scaffold_40_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9434..10306
DNA (873bp) protein (291aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP2_9FIRM
L2_023_246G1_scaffold_40_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10303..10752
DNA (450bp) protein (150aa)
Arginine repressor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP3_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
argR; arginine repressor
L2_023_246G1_scaffold_40_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10784..12487
DNA (1704bp) protein (568aa)
DNA repair protein RecN n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP4_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
recN; DNA repair protein RecN
L2_023_246G1_scaffold_40_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12701..13174
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48129.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Multisubunit Na+/H+ antiporter, MnhE subunit
L2_023_246G1_scaffold_40_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13167..13469
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48128.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative transporter
L2_023_246G1_scaffold_40_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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13466..13795
DNA (330bp) protein (110aa)
Monovalent cation/proton antiporter, MnhG/PhaG subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC93_9FIRM
Monovalent cation/proton antiporter, MnhG/PhaG subunit {ECO:0000313|EMBL:EGJ48127.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Multisubunit Na+/H+ antiporter, MnhG subunit
L2_023_246G1_scaffold_40_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13792..14049
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48126.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_246G1_scaffold_40_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14039..15049
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48125.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Multisubunit Na+/H+ antiporter, MnhB subunit
L2_023_246G1_scaffold_40_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15053..15430
DNA (378bp) protein (126aa)
Multicomponent Na+:H+ antiporter subunit C n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC90_9FIRM
Multicomponent Na+:H+ antiporter subunit C {ECO:0000313|EMBL:EGJ48124.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Multisubunit Na+/H+ antiporter, MnhC subunit
L2_023_246G1_scaffold_40_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15465..16958
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48123.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative transporter
L2_023_246G1_scaffold_40_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16991..18469
DNA (1479bp) protein (493aa)
Multicomponent Na+:H+ antiporter subunit D n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC88_9FIRM
Multicomponent Na+:H+ antiporter subunit D {ECO:0000313|EMBL:EGJ48122.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative transporter
L2_023_246G1_scaffold_40_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18501..19937
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48121.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative transporter
L2_023_246G1_scaffold_40_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19971..21992
DNA (2022bp) protein (674aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RVL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQN60560.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
L2_023_246G1_scaffold_40_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22004..22774)
DNA (771bp) protein (257aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC84_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative RNA polymerase sigma factor
L2_023_246G1_scaffold_40_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22909..23703)
DNA (795bp) protein (265aa)
ZIP family zinc transporter n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC82_9FIRM
ZIP family zinc transporter {ECO:0000313|EMBL:EGJ48116.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
zinc/iron permease
L2_023_246G1_scaffold_40_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23951..24667
DNA (717bp) protein (239aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC81_9FIRM
L2_023_246G1_scaffold_40_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24710..25264
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC80_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
frr; ribosome recycling factor
L2_023_246G1_scaffold_40_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25419..26159
DNA (741bp) protein (247aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC79_9FIRM
L2_023_246G1_scaffold_40_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26161..26979
DNA (819bp) protein (273aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Phosphatidate cytidylyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC78_9FIRM
cdsA; phosphatidate cytidylyltransferase
Displaying items 1-30 of 338 in total

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