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L2_023_246G1_scaffold_136

Search features with annotation key words

Displaying items 1-30 of 235 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_136_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..208
DNA (207bp) protein (69aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA n=6 Tax=Erysipelotrichaceae RepID=B0N3U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47920.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
FAD dependent oxidoreductase family protein
L2_023_246G1_scaffold_136_2
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(259..1818)
DNA (1560bp) protein (520aa)
Chloride transporter, ClC family n=4 Tax=Erysipelotrichaceae RepID=B0N3U1_9FIRM
Chloride transporter, ClC family {ECO:0000313|EMBL:EDS19113.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Group I intron
L2_023_246G1_scaffold_136_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1944..2399
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=5 Tax=Erysipelotrichaceae RepID=B0N3U2_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCZ36634.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hpr; HTH-type transcriptional regulator Hpr
L2_023_246G1_scaffold_136_4
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2573..3202)
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RLK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91597.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
comFC; putative competence protein ComFC
L2_023_246G1_scaffold_136_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3169..4272)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=H1AGF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36632.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
L2_023_246G1_scaffold_136_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4543..4740
DNA (198bp) protein (66aa)
Cold-shock DNA-binding domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N3U5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47925.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cold-shock DNA-binding domain-containing protein
L2_023_246G1_scaffold_136_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4840..7473
DNA (2634bp) protein (878aa)
Protein translocase subunit SecA n=5 Tax=Erysipelotrichaceae RepID=B0N3U6_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
secA1; Protein translocase subunit SecA 1
L2_023_246G1_scaffold_136_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7473..8570
DNA (1098bp) protein (366aa)
Peptide chain release factor 2 n=5 Tax=Erysipelotrichaceae RepID=B0N3U7_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
prfB; peptide chain release factor 2, programmed frameshift
L2_023_246G1_scaffold_136_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8584..9441
DNA (858bp) protein (286aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=G9R1H6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36627.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_023_246G1_scaffold_136_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9487..9699)
DNA (213bp) protein (71aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36626.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_023_246G1_scaffold_136_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9886..10569
DNA (684bp) protein (228aa)
Cell division ATP-binding protein FtsE n=4 Tax=Erysipelotrichaceae RepID=B0N3V0_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EHQ47930.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cell division ATP-binding protein FtsE
L2_023_246G1_scaffold_136_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10569..11480
DNA (912bp) protein (304aa)
Cell division protein FtsX n=2 Tax=Erysipelotrichaceae RepID=B0N3V1_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ftsX; cell division protein
L2_023_246G1_scaffold_136_13
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11520..12209
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AGG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47932.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
GCN5-like N-acetyltransferase
L2_023_246G1_scaffold_136_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12225..13595
DNA (1371bp) protein (457aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RLK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47933.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
transglutaminase
L2_023_246G1_scaffold_136_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13658..13909
DNA (252bp) protein (84aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N3V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36622.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_023_246G1_scaffold_136_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14051..15808)
DNA (1758bp) protein (586aa)
ABC transporter, ATP-binding protein n=5 Tax=Erysipelotrichaceae RepID=B0N3V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47935.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ATPase components of ABC transporters with duplicated ATPase domains
L2_023_246G1_scaffold_136_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15926..16756
DNA (831bp) protein (277aa)
Transcriptional regulator, MerR family n=4 Tax=Erysipelotrichaceae RepID=B0N3V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47936.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_023_246G1_scaffold_136_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16829..17866
DNA (1038bp) protein (346aa)
Dihydrodipicolinate reductase domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N3V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91611.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
dihydrodipicolinate reductase
L2_023_246G1_scaffold_136_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17972..18289
DNA (318bp) protein (106aa)
Transcriptional regulator, PadR family n=5 Tax=Erysipelotrichaceae RepID=B0N3V8_9FIRM
Transcriptional regulator PadR family {ECO:0000313|EMBL:CCZ36618.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative transcriptional regulator
L2_023_246G1_scaffold_136_20
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18645..19937
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N3V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19131.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L2_023_246G1_scaffold_136_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20276..20410
DNA (135bp) protein (45aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36616.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_023_246G1_scaffold_136_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20407..20688
DNA (282bp) protein (94aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3W1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36615.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_023_246G1_scaffold_136_23
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20652..20861
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RLL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91616.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Mn-containing catalase
L2_023_246G1_scaffold_136_24
Clostridium sp. CAG:798, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20883..22403)
DNA (1521bp) protein (507aa)
Recombinase n=1 Tax=Clostridium sp. CAG:798 RepID=R6XL45_9CLOT
resolvase
Recombinase {ECO:0000313|EMBL:CDD16991.1}; TaxID=1262841 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:798.;"
L2_023_246G1_scaffold_136_25
unknown

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comp(22441..22659)
DNA (219bp) protein (73aa)

This feature has no annotations

L2_023_246G1_scaffold_136_26
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22703..23119)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CPM0_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48281.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
hypothetical protein
L2_023_246G1_scaffold_136_27
unknown

Not on your lists

comp(23139..23369)
DNA (231bp) protein (77aa)

This feature has no annotations

L2_023_246G1_scaffold_136_28
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23370..23795)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46184.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_023_246G1_scaffold_136_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23823..24248)
DNA (426bp) protein (142aa)
Transcriptional regulator, XRE family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MGA3_ALKOO
XRE family transcriptional regulator {ECO:0000313|EMBL:KEH93255.1}; TaxID=1443126 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. It1.;"
XRE family transcriptional regulator
L2_023_246G1_scaffold_136_30
unknown

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24401..24589
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Allofustis seminis RepID=UPI0003754515
Displaying items 1-30 of 235 in total

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