ggKbase home page

L2_023_246G1_scaffold_162

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_162_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

326..922
DNA (597bp) protein (199aa)
SNARE-like domain protein n=2 Tax=Clostridium RepID=B6FJ07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22440.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_023_246G1_scaffold_162_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

954..2204
DNA (1251bp) protein (417aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEA83984.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEA83984.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJ06_9CLOT
glycosyltransferase
L2_023_246G1_scaffold_162_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2185..3117
DNA (933bp) protein (311aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEA83983.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEA83983.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJ05_9CLOT
Glycosyltransferase
L2_023_246G1_scaffold_162_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3168..3836)
DNA (669bp) protein (223aa)
30S ribosomal protein S1 n=2 Tax=Clostridium RepID=B6FJ02_9CLOT
30S ribosomal protein S1 {ECO:0000313|EMBL:EEA83992.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Ribosomal protein S1
L2_023_246G1_scaffold_162_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3975..5624
DNA (1650bp) protein (550aa)
Inorganic pyrophosphatase/exopolyphosphatase (EC:3.6.1.1)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PVB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22436.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_023_246G1_scaffold_162_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5635..6216
DNA (582bp) protein (194aa)
Flavin reductase-like protein n=2 Tax=Clostridium RepID=B6FJ00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22435.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L2_023_246G1_scaffold_162_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6319..6990
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PNK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22434.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted xylanase/chitin deacetylase
L2_023_246G1_scaffold_162_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7009..7728
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PDP2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22433.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L2_023_246G1_scaffold_162_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7742..9073
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QKE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22432.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
L2_023_246G1_scaffold_162_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9117..9962)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84022.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_023_246G1_scaffold_162_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9965..10693)
DNA (729bp) protein (243aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FIZ4_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA84021.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
bcrA2; bacitracin transport ATP-binding protein BcrA
L2_023_246G1_scaffold_162_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10814..11326)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84020.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_023_246G1_scaffold_162_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11339..12271)
DNA (933bp) protein (311aa)
Radical SAM protein, TIGR01212 family n=2 Tax=Clostridium RepID=B6FIZ2_9CLOT
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:EEA84019.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
radical SAM protein, TIGR01212 family
L2_023_246G1_scaffold_162_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12271..13419)
DNA (1149bp) protein (383aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme, NAD binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIZ1_9CLOT
Malic enzyme, NAD binding domain protein {ECO:0000313|EMBL:EEA84018.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_023_246G1_scaffold_162_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13621..14946
DNA (1326bp) protein (442aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transcription termination factor Rho n=2 Tax=Clostridium RepID=B6FIZ0_9CLOT
transcription termination factor Rho
L2_023_246G1_scaffold_162_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15096..15299
DNA (204bp) protein (68aa)
50S ribosomal protein L31 n=2 Tax=Clostridium RepID=B6FIY9_9CLOT
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
RpmE; 50S ribosomal protein L31
L2_023_246G1_scaffold_162_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15401..16303
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84015.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted metal-dependent enzyme
L2_023_246G1_scaffold_162_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16300..17163
DNA (864bp) protein (288aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Release factor glutamine methyltransferase n=2 Tax=Clostridium RepID=B6FIY7_9CLOT
protein-(glutamine-N5) methyltransferase, release factor-specific
L2_023_246G1_scaffold_162_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17219..18289
DNA (1071bp) protein (357aa)
Peptide chain release factor 1 n=1 Tax=Clostridium nexile CAG:348 RepID=R6QKD4_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
bacterial peptide chain release factor 1 (bRF-1)
L2_023_246G1_scaffold_162_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18456..20192
DNA (1737bp) protein (579aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIY5_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA84012.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase and permease components
L2_023_246G1_scaffold_162_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20296..21201
DNA (906bp) protein (302aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22420.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_023_246G1_scaffold_162_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21216..22403
DNA (1188bp) protein (396aa)
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.1)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PNI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22419.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_023_246G1_scaffold_162_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22419..23495
DNA (1077bp) protein (359aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PDM4_9CLOT
L2_023_246G1_scaffold_162_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23489..24337
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84008.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted membrane protein
L2_023_246G1_scaffold_162_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24339..25022
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84007.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA alkylation repair protein
L2_023_246G1_scaffold_162_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25045..25878
DNA (834bp) protein (278aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIX9_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEA84006.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
AraC-type DNA-binding domain-containing proteins
L2_023_246G1_scaffold_162_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26015..26632
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22407.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_023_246G1_scaffold_162_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26651..28135
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PV78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22406.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L-fucose isomerase and related proteins
L2_023_246G1_scaffold_162_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28235..29707
DNA (1473bp) protein (491aa)
Xylulokinase {ECO:0000313|EMBL:EEA84003.1}; EC=2.7.1.17 {ECO:0000313|EMBL:EEA84003.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
xylulokinase (EC:2.7.1.17)
Xylulokinase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIX6_9CLOT
L2_023_246G1_scaffold_162_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29754..30635)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PNH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22404.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
AraC family transcriptional regulator
Displaying items 1-30 of 64 in total

View Taxonomy