ggKbase home page

L2_023_246G1_scaffold_224

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_224_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24..467)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BNZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI79854.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_023_246G1_scaffold_224_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(553..1365)
DNA (813bp) protein (271aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=2 Tax=Clostridiales RepID=H1CJX4_9FIRM
L2_023_246G1_scaffold_224_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1563..1979
DNA (417bp) protein (139aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YR85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55052.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_023_246G1_scaffold_224_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2039..4309)
DNA (2271bp) protein (757aa)
Copper amine oxidase domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YV91_9FIRM
Copper amine oxidase domain protein {ECO:0000313|EMBL:EHM40661.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_023_246G1_scaffold_224_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4438..5832)
DNA (1395bp) protein (465aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26655.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_023_246G1_scaffold_224_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5813..6373)
DNA (561bp) protein (187aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJW9_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO26654.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase sigma factor
L2_023_246G1_scaffold_224_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6801..9155
DNA (2355bp) protein (785aa)
protein serine/threonine phosphatase (EC:3.1.3.16)
Putative stage II sporulation protein E n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C1R7_9CLOT
Putative stage II sporulation protein E {ECO:0000313|EMBL:ERI61331.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_023_246G1_scaffold_224_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9498..12434
DNA (2937bp) protein (979aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26652.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
cell wall/surface repeat protein
L2_023_246G1_scaffold_224_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12453..12731
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26651.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
cellulosome anchoring protein cohesin subunit
L2_023_246G1_scaffold_224_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12793..12951)
DNA (159bp) protein (53aa)
Rubredoxin n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2A6C1_9CLOT
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Rubredoxin
L2_023_246G1_scaffold_224_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13080..14054
DNA (975bp) protein (325aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
tRNA-dihydrouridine synthase n=2 Tax=Clostridiales RepID=H1CJW4_9FIRM
dus; tRNA-dihydrouridine synthase
L2_023_246G1_scaffold_224_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14092..14688
DNA (597bp) protein (199aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJW3_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO26808.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase ECF subfamily sigma factor
L2_023_246G1_scaffold_224_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14722..15606
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55068.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_023_246G1_scaffold_224_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15898..17976
DNA (2079bp) protein (693aa)
Translation elongation factor G n=2 Tax=Clostridiales RepID=H1CJW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55067.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
fusA; putative elongation factor G
L2_023_246G1_scaffold_224_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18082..18687)
DNA (606bp) protein (202aa)
ydeA; protease YdeA (EC:3.2.-.-)
DJ-1/PfpI family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVA6_9FIRM
DJ-1/PfpI family protein {ECO:0000313|EMBL:EHM40676.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_023_246G1_scaffold_224_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18745..19686)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26804.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
yobV; HTH-type transcriptional regulator YobV
L2_023_246G1_scaffold_224_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19817..21301)
DNA (1485bp) protein (495aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26803.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_023_246G1_scaffold_224_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21468..21833
DNA (366bp) protein (122aa)
Transcriptional regulator, BlaI/MecI/CopY family n=2 Tax=Clostridiales RepID=U2D112_9CLOT
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:ERI73191.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative BlaI family transcriptional regulator
L2_023_246G1_scaffold_224_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21837..23774
DNA (1938bp) protein (646aa)
Peptidase, M56 family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BLW2_9CLOT
Peptidase, M56 family {ECO:0000313|EMBL:ERI73190.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
peptidase M56 family protein
L2_023_246G1_scaffold_224_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23771..24343
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26800.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_023_246G1_scaffold_224_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24457..25074)
DNA (618bp) protein (206aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
uridine kinase (EC:2.7.1.48)
Uridine kinase n=3 Tax=Clostridiales RepID=G9YNB3_9FIRM
L2_023_246G1_scaffold_224_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25150..26106)
DNA (957bp) protein (319aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Selenide, water dikinase n=2 Tax=Clostridiales RepID=G9YNB2_9FIRM
Selenide, water dikinase
L2_023_246G1_scaffold_224_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26322..26612
DNA (291bp) protein (97aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YNB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26797.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_023_246G1_scaffold_224_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26629..27915)
DNA (1287bp) protein (429aa)
HDOD domain protein n=2 Tax=Clostridiales RepID=U2D145_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO26796.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_023_246G1_scaffold_224_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27912..28853)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CJV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26795.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
cheV; chemotaxis protein CheV
L2_023_246G1_scaffold_224_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28894..29385)
DNA (492bp) protein (164aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
cheD; chemoreceptor glutamine deamidase CheD (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD n=3 Tax=Clostridiales RepID=G9YNA7_9FIRM
L2_023_246G1_scaffold_224_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29369..29989)
DNA (621bp) protein (207aa)
CheC-like family protein n=3 Tax=Clostridiales RepID=G9YNA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26793.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
cheC; chemotaxis protein CheC
L2_023_246G1_scaffold_224_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30003..30734)
DNA (732bp) protein (244aa)
Flagellar hook-basal body protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BLZ1_9CLOT
Flagellar hook-basal body protein {ECO:0000313|EMBL:ERI73230.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
flgG; flagellar basal-body rod protein FlgG
L2_023_246G1_scaffold_224_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30751..31503)
DNA (753bp) protein (251aa)
Flagellar hook-basal body protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D148_9CLOT
Flagellar hook-basal body protein {ECO:0000313|EMBL:ERI73231.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
flhO; flagellar hook-basal body complex protein FlhO
L2_023_246G1_scaffold_224_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31529..32350)
DNA (822bp) protein (274aa)
RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJU5_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
fliA; RNA polymerase sigma factor for flagellar operon
Displaying items 1-30 of 69 in total

View Taxonomy