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L2_023_246G1_scaffold_243

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Displaying items 1-30 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_243_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..972)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46905.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_246G1_scaffold_243_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1437..1769
DNA (333bp) protein (111aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YQF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22432.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transcriptional regulator
L2_023_246G1_scaffold_243_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1903..2463
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJY6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFB77084.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_023_246G1_scaffold_243_4
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2627..2950
DNA (324bp) protein (108aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFU5_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDO57371.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Predicted transcriptional regulator with C-terminal CBS domains
L2_023_246G1_scaffold_243_5
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3076..3330)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M3Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62602.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
HTH domain-containing protein
L2_023_246G1_scaffold_243_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3347..5161)
DNA (1815bp) protein (605aa)
TraG/TraD family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21708.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_023_246G1_scaffold_243_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5317..5787)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43906.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_023_246G1_scaffold_243_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5762..6181)
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P7A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23710.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_023_246G1_scaffold_243_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6903..7970)
DNA (1068bp) protein (356aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE90_9FIRM
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EGJ46390.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_023_246G1_scaffold_243_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8286..10271
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46388.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hydrolase
L2_023_246G1_scaffold_243_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10379..10828
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE87_9FIRM
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rplI; 50S ribosomal protein L9
L2_023_246G1_scaffold_243_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11004..12359
DNA (1356bp) protein (452aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE86_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:EGJ46386.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_023_246G1_scaffold_243_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12419..13888
DNA (1470bp) protein (490aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE85_9FIRM
tRNA(Ile) lysidine-34 synthase
L2_023_246G1_scaffold_243_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13906..14448
DNA (543bp) protein (181aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE84_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EGJ46384.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_023_246G1_scaffold_243_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14531..16405
DNA (1875bp) protein (625aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ftsH; cell division protein FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE83_9FIRM
L2_023_246G1_scaffold_243_16
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(16452..17075)
DNA (624bp) protein (208aa)
Stage II sporulation protein R n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YKA4_9FIRM
Stage II sporulation protein R {ECO:0000313|EMBL:ESL15631.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative stage II sporulation protein R
L2_023_246G1_scaffold_243_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17142..17993)
DNA (852bp) protein (284aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEQ0_9FIRM
L2_023_246G1_scaffold_243_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18010..19293)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46549.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_246G1_scaffold_243_19
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(19357..19959)
DNA (603bp) protein (201aa)
thrH; phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein ThrH (EC:3.1.3.3)
Phosphoserine phosphatase/homoserine phosphotransferase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZM07_9FIRM
Phosphoserine phosphatase/homoserine phosphotransferase {ECO:0000313|EMBL:ESL15635.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L2_023_246G1_scaffold_243_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20053..21240)
DNA (1188bp) protein (396aa)
Aminotransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEP6_9FIRM
Aminotransferase {ECO:0000313|EMBL:EGJ46546.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
class I and II aminotransferase
L2_023_246G1_scaffold_243_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21237..21716)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46545.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
AsnC family transcriptional regulator
L2_023_246G1_scaffold_243_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22013..22717)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46519.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
asparagine synthase
L2_023_246G1_scaffold_243_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22901..23671)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46518.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
PP-loop domain-containing protein
L2_023_246G1_scaffold_243_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23944..24375
DNA (432bp) protein (144aa)
50S ribosomal protein L13 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEL7_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
50S ribosomal protein L13
L2_023_246G1_scaffold_243_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24393..24797
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEL6_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpsI; 30S ribosomal protein S9
L2_023_246G1_scaffold_243_26
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(25130..26536)
DNA (1407bp) protein (469aa)
PAS domain S-box protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PXV9_9FUSO
PAS domain S-box protein {ECO:0000313|EMBL:EHO77674.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
hypothetical protein
L2_023_246G1_scaffold_243_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26825..27559
DNA (735bp) protein (245aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B234_RUMGN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDN78306.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
putative Xre family DNA-binding protein
L2_023_246G1_scaffold_243_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28035..29582)
DNA (1548bp) protein (516aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16)
Ribonuclease Y n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEB3_9FIRM
L2_023_246G1_scaffold_243_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29952..31835)
DNA (1884bp) protein (628aa)
putative glycoside hydrolase (EC:3.2.1.-)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46362.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_023_246G1_scaffold_243_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31939..32877)
DNA (939bp) protein (313aa)
Uridine kinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE61_9FIRM
Uridine kinase {ECO:0000313|EMBL:EGJ46361.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative phosphotransferase
Displaying items 1-30 of 192 in total

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