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L2_023_246G1_scaffold_261

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_261_1
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3..449
DNA (447bp) protein (149aa)
Outer membrane efflux protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FRK4_9FIRM
Outer membrane efflux protein {ECO:0000313|EMBL:EEP64999.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
outer membrane efflux protein
L2_023_246G1_scaffold_261_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

480..1016
DNA (537bp) protein (179aa)
ECF-type riboflavin transporter, S component family protein n=8 Tax=Clostridium difficile RepID=T3HD11_CLODI
Putative membrane protein {ECO:0000313|EMBL:CDS88905.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L2_023_246G1_scaffold_261_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1233..3296)
DNA (2064bp) protein (688aa)
Uncharacterized protein n=19 Tax=Clostridium difficile RepID=T2T9S5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQG74202.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
hypothetical protein
L2_023_246G1_scaffold_261_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3677..7012)
DNA (3336bp) protein (1112aa)
DEAD/DEAH box helicase family protein n=7 Tax=Clostridium difficile RepID=T2VKT4_CLODI
Helicase protein {ECO:0000313|EMBL:CDS89542.1}; Type i restriction enzyme r subunit {ECO:0000313|EMBL:CDS88909.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
type i restriction enzyme r subunit
L2_023_246G1_scaffold_261_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7062..7490)
DNA (429bp) protein (143aa)
Oligo-1,6-glucosidase domain protein {ECO:0000313|EMBL:EQG74411.1}; EC=3.2.1.10 {ECO:0000313|EMBL:EQG74411.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Nucleotidyltransferase domain protein n=138 Tax=Clostridium difficile RepID=T3KU77_CLODI
hypothetical protein
L2_023_246G1_scaffold_261_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7480..7860)
DNA (381bp) protein (127aa)
Nucleotidyltransferase domain protein n=97 Tax=Clostridium difficile RepID=G6BYN6_CLODI
hypothetical protein
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EQE59967.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_246G1_scaffold_261_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7893..8201)
DNA (309bp) protein (103aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=T2V9H7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDT70888.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L2_023_246G1_scaffold_261_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8234..9334)
DNA (1101bp) protein (367aa)
Type I restriction modification DNA specificity domain protein n=9 Tax=Clostridium difficile RepID=T2V8Y6_CLODI
Type I restriction modification DNA specificity domain protein (Modular protein) {ECO:0000313|EMBL:CDS89550.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS88916.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
type I restriction-modification system subunit S
L2_023_246G1_scaffold_261_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9338..10801)
DNA (1464bp) protein (488aa)
N-6 DNA Methylase family protein n=9 Tax=Clostridium difficile RepID=T2VAA2_CLODI
N-6 DNA Methylase {ECO:0000313|EMBL:CDS89552.1}; Type i restriction enzyme m subunit {ECO:0000313|EMBL:CDS88918.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
type i restriction enzyme m subunit
L2_023_246G1_scaffold_261_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11311..12180)
DNA (870bp) protein (290aa)
Tagatose-bisphosphate aldolase {ECO:0000313|EMBL:CCL23460.1}; EC=4.1.2.2 {ECO:0000313|EMBL:CCL23460.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
tagatose-bisphosphate aldolase (EC:4.1.2.2)
Ketose-bisphosphate aldolase family protein n=53 Tax=Clostridium difficile RepID=T2TCW0_CLODI
L2_023_246G1_scaffold_261_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12200..14116)
DNA (1917bp) protein (639aa)
PTS system, fructose subfamily, IIA component domain protein {ECO:0000313|EMBL:EQE59951.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQE59951.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
PTS system, fructose subfamily, IIA component domain protein n=44 Tax=Clostridium difficile RepID=T2VL08_CLODI
tagT; PTS system transporter subunit IIABC
L2_023_246G1_scaffold_261_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14119..15075)
DNA (957bp) protein (319aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
Tagatose-6-phosphate kinase n=26 Tax=Clostridium difficile RepID=G6BYP2_CLODI
tagK; tagatose (1)-phosphate-kinase
L2_023_246G1_scaffold_261_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15141..15893)
DNA (753bp) protein (251aa)
Phosphosugar-binding transcriptional regulator n=186 Tax=Clostridium difficile RepID=C9XQF1_CLODC
phosphosugar-binding transcriptional regulator
Phosphosugar-binding transcriptional regulator {ECO:0000313|EMBL:CDS89562.1}; Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CDT70813.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_023_246G1_scaffold_261_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16189..16806)
DNA (618bp) protein (206aa)
Uncharacterized protein n=22 Tax=Clostridium difficile RepID=T2UD71_CLODI
Putative membrane protein {ECO:0000313|EMBL:CDS88928.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative membrane protein
L2_023_246G1_scaffold_261_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16905..18341)
DNA (1437bp) protein (479aa)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:CDT70795.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CDT70795.1};; Aryl-phospho-beta-d-glucosidase {ECO:0000313|EMBL:CDS89566.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CDS89566.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
bglA1; 6-phospho-beta-glucosidase, bglA1 (EC:3.2.1.86)
Aryl-phospho-beta-D-glucosidase BglH n=7 Tax=Clostridium difficile RepID=T2VJ05_CLODI
L2_023_246G1_scaffold_261_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18372..18725)
DNA (354bp) protein (118aa)
PTS system, Lactose/Cellobiose specific IIA subunit n=123 Tax=Clostridium difficile RepID=T3G9X7_CLODC
PTS system, lactose/cellobiose-family IIAcomponent
PTS system, lactose/cellobiose-family IIA component {ECO:0000313|EMBL:CCL23465.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_023_246G1_scaffold_261_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18754..19986)
DNA (1233bp) protein (411aa)
Phosphotransferase system, EIIC family protein n=7 Tax=Clostridium difficile RepID=T2VKD9_CLODI
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
PTS system transporter subunit IIC
L2_023_246G1_scaffold_261_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20009..20353)
DNA (345bp) protein (115aa)
Oligo-beta-mannoside-specific phosphotransferase enzyme IIB component n=1 Tax=Clostridium difficile P23 RepID=T4M0P0_CLODI
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EHJ34431.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
PTS system transporter subunit IIB
L2_023_246G1_scaffold_261_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20574..22487
DNA (1914bp) protein (638aa)
PRD domain protein n=8 Tax=Clostridium difficile RepID=T2VJB2_CLODI
Transcription antiterminator, PTS operon regulator {ECO:0000313|EMBL:CDS89575.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Transcription antiterminator, PTS operonregulator
L2_023_246G1_scaffold_261_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22622..23764)
DNA (1143bp) protein (381aa)
Glycerate kinase {ECO:0000313|EMBL:CDT70738.1}; EC=2.7.1.31 {ECO:0000313|EMBL:CDT70738.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Glycerate kinase family protein n=6 Tax=Clostridium difficile RepID=T3HFV9_CLODI
garK; glycerate kinase
L2_023_246G1_scaffold_261_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24044..26659)
DNA (2616bp) protein (872aa)
Alpha-mannosidase {ECO:0000313|EMBL:CDS88942.1}; EC=3.2.1.24 {ECO:0000313|EMBL:CDS88942.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
mngB; alpha-mannosidase (EC:3.2.1.24)
Alpha-mannosidase mngB n=7 Tax=Clostridium difficile RepID=T2VJ88_CLODI
L2_023_246G1_scaffold_261_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26803..28728)
DNA (1926bp) protein (642aa)
Fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component IIB component IIC component {ECO:0000313|EMBL:CDS89582.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDS89582.1};; PTS system, 2-O-a-mannosyl-D-glycerate-specific IIABC component {ECO:0000313|EMBL:CDS88944.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDS88944.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
mngA; PTS system, 2-O-a-mannosyl-D-glycerate-specificIIABC component (EC:2.7.1.69)
Heat-responsive suppressor hrsA n=7 Tax=Clostridium difficile RepID=T2VJC5_CLODI
L2_023_246G1_scaffold_261_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28858..29613)
DNA (756bp) protein (252aa)
Phosphosugar-binding transcriptional regulator n=63 Tax=Clostridium difficile RepID=C9XQG1_CLODC
phosphosugar-binding transcriptional regulator
Phosphosugar-binding transcriptional regulator {ECO:0000313|EMBL:CBE06606.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_023_246G1_scaffold_261_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29846..30625)
DNA (780bp) protein (260aa)
putative cellobiose-phosphate degrading protein n=1 Tax=Clostridium difficile RepID=UPI0001B4633A
cellobiose-phosphate degrading protein
YdjC-like family protein {ECO:0000313|EMBL:EQG74437.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_023_246G1_scaffold_261_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30618..32066)
DNA (1449bp) protein (483aa)
PTS system, glucose-like IIBC component {ECO:0000313|EMBL:CCL23474.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCL23474.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
PTS system, glucose-like IIBC component n=19 Tax=Clostridium difficile RepID=U4CB04_CLODI
PTS system transporter subunit IIABC
L2_023_246G1_scaffold_261_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32436..33158
DNA (723bp) protein (241aa)
Bacterial regulatory s, gntR family protein n=7 Tax=Clostridium difficile RepID=T2VKU9_CLODI
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDT70676.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
GntR-family transcriptional regulator
L2_023_246G1_scaffold_261_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33355..35022
DNA (1668bp) protein (556aa)
Trehalose-6-phosphate hydrolase {ECO:0000313|EMBL:CDT49123.1}; EC=3.2.1.93 {ECO:0000313|EMBL:CDT49123.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
treA; Trehalose-6-phosphate hydrolase (EC:3.2.1.93)
Trehalose-6-phosphate hydrolase n=15 Tax=Clostridium difficile RepID=T2VJN2_CLODI
L2_023_246G1_scaffold_261_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35118..36437)
DNA (1320bp) protein (440aa)
Amino acid permease family protein n=7 Tax=Clostridium difficile RepID=T2VKE9_CLODI
Amino acid permease {ECO:0000313|EMBL:CDS89595.1}; Putative amino acid permease {ECO:0000313|EMBL:CDS88956.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative amino acid permease
L2_023_246G1_scaffold_261_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36478..37224)
DNA (747bp) protein (249aa)
Glutamine amidotransferase class-I family protein n=1 Tax=Clostridium difficile CD34 RepID=T2VMU2_CLODI
glutamine amidotransferase
Putative glutamine amidotransferase {ECO:0000313|EMBL:CBE06616.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_023_246G1_scaffold_261_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37468..39477)
DNA (2010bp) protein (670aa)
AAA domain family protein n=7 Tax=Clostridium difficile RepID=T2VJ63_CLODI
Transcriptional regulator, sigma-54-dependent {ECO:0000313|EMBL:CDT49169.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
sigma-54 dependent transcriptional regulator
Displaying items 1-30 of 47 in total

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